RNA–Protein interactions for RNA: ENST00000328495.9

CCDC144A-201, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 2

Gene CCDC144A, Length 3,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-201ENST00000328495 CABP5Q9NP86 173 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 TMEM260Q9NX78 707 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 PPP4R1LQ9P1A2 415 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ASB1Q9Y576 335 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 B3GALT1Q9Y5Z6 326 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 SLC4A7Q9Y6M7 1214 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 NUP160Q12769 1436 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 SDHAP31040 664 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ECE1P42892 770 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 RANGAP1P46060 587 aaPredicted RBP2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 IL13RA1P78552 427 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 CHST14Q8NCH0 376 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 ASB15Q8WXK1 588 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 DLG3Q92796 817 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 E2F7Q96AV8 911 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 SCYL1Q96KG9 808 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 GPR20Q99678 358 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 SAMD15Q9P1V8 674 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 PREX2Q70Z35 1606 aa2.37□□□□□ -2.03
CCDC144A-201ENST00000328495 M0R2C6 588 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 HMGCRP04035 888 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 HSPA1AP0DMV8 641 aaKnown RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 HSPA1BP0DMV9 641 aaKnown RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 ADAM17P78536 824 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 NFKB2Q00653 900 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 TMEM132BQ14DG7 1078 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 SEC23AQ15436 765 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 STILQ15468 1287 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 ABHD17CQ6PCB6 329 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 OTOP1Q7RTM1 612 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 OTOP2Q7RTS6 562 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 LIMS2Q7Z4I7 341 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 WNK4Q96J92 1243 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 C8orf49Q96NF6 230 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 SSBP3Q9BWW4 388 aaPredicted RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 KRTAP9-8Q9BYQ0 159 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 OR10A5Q9H207 317 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 UCKL1Q9NWZ5 548 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 NRKQ7Z2Y5 1582 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 PRAMEF22A3QJZ6 481 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 RFPL3O75679 317 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 GLRX3O76003 335 aaKnown RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 KRT37O76014 449 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 CNOT4O95628 575 aaKnown RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 ASMTLO95671 621 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 MPIG6BO95866 241 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 KCNA6P17658 529 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 ADCY8P40145 1251 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 MAP3K12Q12852 859 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 TCEA2Q15560 299 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 FSTL4Q6MZW2 842 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 UBE2R2Q712K3 238 aaPredicted RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 HOMER1Q86YM7 354 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 CLUHP3Q96NS8 147 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 LMF1Q96S06 567 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 ZDHHC5Q9C0B5 715 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 MEGF9Q9H1U4 602 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 PCIF1Q9H4Z3 704 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 TNPO3Q9Y5L0 923 aaKnown RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 GRIN2AQ12879 1464 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 TIAM1Q13009 1591 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 C3P01024 1663 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 TNRC6CQ9HCJ0 1690 aaKnown RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 ROBO1Q9Y6N7 1651 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 CCDC88BA6NC98 1476 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 DNAJC8O75937 253 aaPredicted RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 ZNF888P0CJ79 500 aaPredicted RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 FNTBP49356 437 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 MECP2P51608 486 aaKnown RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 KCNQ1P51787 676 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 RAC3P60763 192 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 TM4SF20Q53R12 229 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 CC2D1AQ6P1N0 951 aaPredicted RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 DVL3Q92997 716 aaPredicted RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 AMNQ9BXJ7 453 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 MAGEC2Q9UBF1 373 aaPredicted RBP2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 ADGBQ8N7X0 1667 aa2.36□□□□□ -2.03
CCDC144A-201ENST00000328495 BRWD3Q6RI45 1802 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 A0A0G2JNJ9 132 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 H7C1D1 291 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 PPP1R12AO14974 1030 aaPredicted RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 GPR42O15529 346 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 APEX1P27695 318 aaKnown RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 MEOX1P50221 254 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 KIF11P52732 1056 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 RRADP55042 308 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 FSTL1Q12841 308 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 PABPC4Q13310 644 aaKnown RBP eCLIP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ZNF460Q14592 562 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ZNF174Q15697 407 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 CATSPEREQ5SY80 951 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 PIK3R6Q5UE93 754 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 KANK2Q63ZY3 851 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 GRAMD4Q6IC98 578 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 RTKN2Q8IZC4 609 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 GIMAP8Q8ND71 665 aaPredicted RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 ERCC4Q92889 916 aaPredicted RBP2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 LRRC37BQ96QE4 947 aa2.35□□□□□ -2.03
CCDC144A-201ENST00000328495 C1QTNF3Q9BXJ4 246 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms