RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 SYNGAP1Q96PV0 1343 aa16.37■□□□□ 0.21
TPM3-205ENST00000328159 ZNFX1Q9P2E3 1918 aaKnown RBP16.37■□□□□ 0.21
TPM3-205ENST00000328159 EIF3CLB5ME19 914 aaKnown RBP16.36■□□□□ 0.21
TPM3-205ENST00000328159 SLC16A4O15374 487 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 UBA1P22314 1058 aaKnown RBP16.36■□□□□ 0.21
TPM3-205ENST00000328159 POLR2FP61218 127 aaKnown RBP16.36■□□□□ 0.21
TPM3-205ENST00000328159 KCTD2Q14681 263 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 XKR3Q5GH77 459 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 TSC1Q92574 1164 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 KIFAP3Q92845 792 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 MMP19Q99542 508 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 MPHOSPH6Q99547 160 aaKnown RBP16.36■□□□□ 0.21
TPM3-205ENST00000328159 EIF3CQ99613 913 aaKnown RBP16.36■□□□□ 0.21
TPM3-205ENST00000328159 GANQ9H2C0 597 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 MROH8Q9H579 483 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 NLRC4Q9NPP4 1024 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 ZNF302Q9NR11 478 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 CGNQ9P2M7 1197 aaKnown RBP16.36■□□□□ 0.21
TPM3-205ENST00000328159 PGK2P07205 417 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 SYN2Q92777 582 aaPredicted RBP16.36■□□□□ 0.21
TPM3-205ENST00000328159 CCDC42Q96M95 316 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 FGD4Q96M96 766 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 IRX2Q9BZI1 471 aaPredicted RBP16.36■□□□□ 0.21
TPM3-205ENST00000328159 PDLIM7Q9NR12 457 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 CYP26B1Q9NR63 512 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 ARHGAP20Q9P2F6 1191 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 PNMA3Q9UL41 463 aa16.36■□□□□ 0.21
TPM3-205ENST00000328159 DNAJC25-GNG10A0A024R161 153 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 EXOC3O60645 756 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 DGAT1O75907 488 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 IPO7O95373 1038 aaKnown RBP16.35■□□□□ 0.21
TPM3-205ENST00000328159 SMTNP53814 917 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 ERVK-9P63128 1117 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 APBA1Q02410 837 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 NEDD9Q14511 834 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 EXOC3L4Q17RC7 722 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 DPY19L2P1Q6NXN4 242 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 GBP6Q6ZN66 633 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 C12orf56Q8IXR9 622 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 MCPH1Q8NEM0 835 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 SHCBP1Q8NEM2 672 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 ZNF526Q8TF50 670 aaPredicted RBP16.35■□□□□ 0.21
TPM3-205ENST00000328159 GTF3C2Q8WUA4 911 aaPredicted RBP16.35■□□□□ 0.21
TPM3-205ENST00000328159 TMEM174Q8WUU8 243 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 HVCN1Q96D96 273 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 C17orf75Q9HAS0 396 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 PLCB1Q9NQ66 1216 aa16.35■□□□□ 0.21
TPM3-205ENST00000328159 MAFBQ9Y5Q3 323 aaPredicted RBP16.35■□□□□ 0.21
TPM3-205ENST00000328159 IGKV6D-21A0A0A0MT36 114 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 GTPBP10A4D1E9 387 aaKnown RBP16.34■□□□□ 0.21
TPM3-205ENST00000328159 CCDC169A6NNP5 214 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 SOCS7O14512 581 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 URI1O94763 535 aaPredicted RBP16.34■□□□□ 0.21
TPM3-205ENST00000328159 FARP2O94887 1054 aaPredicted RBP16.34■□□□□ 0.21
TPM3-205ENST00000328159 SLU7O95391 586 aaKnown RBP16.34■□□□□ 0.21
TPM3-205ENST00000328159 PLEKP08567 350 aaPredicted RBP16.34■□□□□ 0.21
TPM3-205ENST00000328159 TGFB3P10600 412 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 SLC9A1P19634 815 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 PON1P27169 355 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 EIF4A3P38919 411 aaKnown RBP16.34■□□□□ 0.21
TPM3-205ENST00000328159 NPTX2P47972 431 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 SNRPFP62306 86 aaKnown RBP16.34■□□□□ 0.21
TPM3-205ENST00000328159 DMP1Q13316 513 aaPredicted RBP16.34■□□□□ 0.21
TPM3-205ENST00000328159 SFMBT2Q5VUG0 894 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 SPIRE2Q8WWL2 714 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 HAUS4Q9H6D7 363 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 ATP6V0A4Q9HBG4 840 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 XPNPEP1Q9NQW7 623 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 EXOC7Q9UPT5 735 aa16.34■□□□□ 0.21
TPM3-205ENST00000328159 GSTTP1A0A1W2PQM5 241 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 TISP43B9A030 160 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 ABL1P00519 1130 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 OATP04181 439 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 CYP2C8P10632 490 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 CETPP11597 493 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 ATP4AP20648 1035 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 PPP2R5AQ15172 486 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 MTERF2Q49AM1 385 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 ZNF569Q5MCW4 686 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 WDR78Q5VTH9 848 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 ZNF662Q6ZS27 426 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 ILDR2Q71H61 639 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 EEPD1Q7L9B9 569 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 KIAA1328Q86T90 577 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 TMEM161BQ8NDZ6 487 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 BSNDQ8WZ55 320 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 NTPCRQ9BSD7 190 aaKnown RBP16.33■□□□□ 0.21
TPM3-205ENST00000328159 KMT5AQ9NQR1 393 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 MYO1AQ9UBC5 1043 aa16.33■□□□□ 0.21
TPM3-205ENST00000328159 ACTN1P12814 892 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 SOX10P56693 466 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 RTP1P59025 263 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 FKBP1BP68106 108 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 SPA17Q15506 151 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 KLHDC7AQ5VTJ3 777 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 HGSNATQ68CP4 663 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 PCIF1Q9H4Z3 704 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 ZNF215Q9UL58 517 aaPredicted RBP16.33■□□□□ 0.2
TPM3-205ENST00000328159 TBX20Q9UMR3 447 aa16.33■□□□□ 0.2
TPM3-205ENST00000328159 MCM3APO60318 1980 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms