RNA–Protein interactions for RNA: ENST00000326279.10

LIN28A-202, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-202ENST00000326279 KIF11P52732 1056 aa14.3□□□□□ -0.12
LIN28A-202ENST00000326279 SPOUT1Q5T280 376 aaKnown RBP14.3□□□□□ -0.12
LIN28A-202ENST00000326279 RGMBQ6NW40 437 aa14.3□□□□□ -0.12
LIN28A-202ENST00000326279 C7orf31Q8N865 590 aa14.3□□□□□ -0.12
LIN28A-202ENST00000326279 ZC3H15Q8WU90 426 aaKnown RBP14.3□□□□□ -0.12
LIN28A-202ENST00000326279 IKZF4Q9H2S9 585 aa14.3□□□□□ -0.12
LIN28A-202ENST00000326279 USTQ9Y2C2 406 aa14.3□□□□□ -0.12
LIN28A-202ENST00000326279 IRS2Q9Y4H2 1338 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 FXR2P51116 673 aaKnown RBP eCLIP14.29□□□□□ -0.12
LIN28A-202ENST00000326279 PEX26Q7Z412 305 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 MSTO1Q9BUK6 570 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 SLX4Q8IY92 1834 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 KCNK3O14649 394 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 NPM3O75607 178 aaKnown RBP14.29□□□□□ -0.12
LIN28A-202ENST00000326279 ACTN1P12814 892 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 MYL7Q01449 175 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 IFFO1Q0D2I5 559 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 DAAM2Q86T65 1068 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 MTMR14Q8NCE2 650 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 PRM3Q9NNZ6 103 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 UBE2TQ9NPD8 197 aaPredicted RBP14.29□□□□□ -0.12
LIN28A-202ENST00000326279 IGKV6D-41A0A0C4DH26 115 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 PHF20L1A8MW92 1017 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 SNHG28P0DPA3 235 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 CYP11B2P19099 503 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 COPB2P35606 906 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 PLCB3Q01970 1234 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 GFPT1Q06210 699 aaPredicted RBP14.29□□□□□ -0.12
LIN28A-202ENST00000326279 MTRQ99707 1265 aa14.29□□□□□ -0.12
LIN28A-202ENST00000326279 GTF2F1P35269 517 aaKnown RBP eCLIP14.28□□□□□ -0.12
LIN28A-202ENST00000326279 CETN2P41208 172 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 PPIL2Q13356 520 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 DEFB115Q30KQ5 88 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 LMBR1Q8WVP7 490 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 HDAC6Q9UBN7 1215 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 AFG3L2Q9Y4W6 797 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 SPDYE5A6NIY4 337 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 SEC31AO94979 1220 aaKnown RBP14.28□□□□□ -0.12
LIN28A-202ENST00000326279 SFNP31947 248 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 MDM2Q00987 491 aaPredicted RBP14.28□□□□□ -0.12
LIN28A-202ENST00000326279 TNFAIP2Q03169 654 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 RPS6KA1Q15418 735 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 RINT1Q6NUQ1 792 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 ARMCX2Q7L311 632 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 SNED1Q8TER0 1413 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 CLDN3O15551 220 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 LMAN1P49257 510 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 KCNA1Q09470 495 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 MFSD14CQ5VZR4 134 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 FAM117BQ6P1L5 589 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 PNMA5Q96PV4 448 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 TXNRD2Q9NNW7 524 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 LAMB4A4D0S4 1761 aa14.28□□□□□ -0.12
LIN28A-202ENST00000326279 SMIM23A6NLE4 172 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 H2AFZP0C0S5 128 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 SARSP49591 514 aaKnown RBP14.27□□□□□ -0.12
LIN28A-202ENST00000326279 PPFIA1Q13136 1202 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 NPY5RQ15761 445 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 TWF2Q6IBS0 349 aaKnown RBP14.27□□□□□ -0.12
LIN28A-202ENST00000326279 H2AFVQ71UI9 128 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 FAM84AQ96KN4 292 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 IWS1Q96ST2 819 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 LIMA1Q9UHB6 759 aaKnown RBP14.27□□□□□ -0.12
LIN28A-202ENST00000326279 PFASO15067 1338 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 PGK1P00558 417 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 FGFR4P22455 802 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 ALDH5A1P51649 535 aaPredicted RBP14.27□□□□□ -0.12
LIN28A-202ENST00000326279 MAPK6Q16659 721 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 NAALADL2Q58DX5 795 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 C8orf74Q6P047 294 aa14.27□□□□□ -0.12
LIN28A-202ENST00000326279 TARS2Q9BW92 718 aaKnown RBP14.27□□□□□ -0.12
LIN28A-202ENST00000326279 TISP43B9A030 160 aa14.27□□□□□ -0.13
LIN28A-202ENST00000326279 LEKR1Q6ZMV7 388 aa14.27□□□□□ -0.13
LIN28A-202ENST00000326279 OTOP1Q7RTM1 612 aa14.27□□□□□ -0.13
LIN28A-202ENST00000326279 CCDC25Q86WR0 208 aa14.27□□□□□ -0.13
LIN28A-202ENST00000326279 FAM107BQ9H098 131 aa14.27□□□□□ -0.13
LIN28A-202ENST00000326279 SUCLA2Q9P2R7 463 aaPredicted RBP14.27□□□□□ -0.13
LIN28A-202ENST00000326279 CDC23Q9UJX2 597 aa14.27□□□□□ -0.13
LIN28A-202ENST00000326279 USP54Q70EL1 1684 aa14.27□□□□□ -0.13
LIN28A-202ENST00000326279 TJP1Q07157 1748 aa14.27□□□□□ -0.13
LIN28A-202ENST00000326279 AOC2O75106 756 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 SLITRK3O94933 977 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 VTNP04004 478 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 GJB1P08034 283 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 CASP4P49662 377 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 ORC2Q13416 577 aaPredicted RBP14.26□□□□□ -0.13
LIN28A-202ENST00000326279 XKR3Q5GH77 459 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 TRIM58Q8NG06 486 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 TNFRSF25Q93038 417 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 RIT2Q99578 217 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 SEMA6BQ9H3T3 888 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 AGO4Q9HCK5 861 aaKnown RBP14.26□□□□□ -0.13
LIN28A-202ENST00000326279 FAM184BQ9ULE4 1060 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 MXI1P50539 228 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 SMC1AQ14683 1233 aaKnown RBP14.26□□□□□ -0.13
LIN28A-202ENST00000326279 PPP2R5AQ15172 486 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 E2F4Q16254 413 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 ECM1Q16610 540 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 KIZQ2M2Z5 673 aa14.26□□□□□ -0.13
LIN28A-202ENST00000326279 ZNF568Q3ZCX4 644 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms