RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CHURC1Q8WUH1 139 aa7.77□□□□□ -1.16
CSTF3-201ENST00000323959 NUP88Q99567 741 aaPredicted RBP7.77□□□□□ -1.16
CSTF3-201ENST00000323959 FRMPD4Q14CM0 1322 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 CDX4O14627 284 aaPredicted RBP7.77□□□□□ -1.17
CSTF3-201ENST00000323959 CYP7A1P22680 504 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 GATMP50440 423 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 ATP8B2P98198 1209 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 C8orf34Q49A92 452 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 TAF1BQ53T94 588 aaPredicted RBP7.77□□□□□ -1.17
CSTF3-201ENST00000323959 ZNF746Q6NUN9 644 aaPredicted RBP7.77□□□□□ -1.17
CSTF3-201ENST00000323959 C1orf228Q6PIY5 440 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 C11orf74Q86VG3 221 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 SSH3Q8TE77 659 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 KIF2CQ99661 725 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 EMILIN2Q9BXX0 1053 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 TYW1Q9NV66 732 aaKnown RBP7.77□□□□□ -1.17
CSTF3-201ENST00000323959 COL4A2P08572 1712 aa7.77□□□□□ -1.17
CSTF3-201ENST00000323959 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 ZNF286BP0CG31 522 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 CTSAP10619 480 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 SEMA3BQ13214 749 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 KARSQ15046 597 aaKnown RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 ELF2Q15723 593 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 NSMFQ6X4W1 530 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 RTN4RL1Q86UN2 441 aaPredicted RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 RSPH1Q8WYR4 309 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 TMEM117Q9H0C3 514 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 ELAC1Q9H777 363 aaKnown RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 NOP58Q9Y2X3 529 aaKnown RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 TERTO14746 1132 aaKnown RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 RAB11FIP3O75154 756 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 BAATQ14032 418 aaPredicted RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 MUM1L1Q5H9M0 696 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 TCEAL6Q6IPX3 200 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 CHD1LQ86WJ1 897 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 LRRC43Q8N309 656 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 GMCL1P1Q8NEA9 526 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 TCEAL3Q969E4 200 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 USP44Q9H0E7 712 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 MKNK2Q9HBH9 465 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 SNRKQ9NRH2 765 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 DMXL2Q8TDJ6 3036 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 COL6A6A6NMZ7 2263 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 CLEC18AA5D8T8 446 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 EPB41L2O43491 1005 aaKnown RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 MLLT6P55198 1093 aaPredicted RBP7.76□□□□□ -1.17
CSTF3-201ENST00000323959 PTGDRQ13258 359 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 WTAPQ15007 396 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 BMP2KLQ5H9B9 411 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 CLEC18BQ6UXF7 455 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 CLEC18CQ8NCF0 446 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 SMOC1Q9H4F8 434 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 LMAN1LQ9HAT1 526 aa7.76□□□□□ -1.17
CSTF3-201ENST00000323959 SPTAN1Q13813 2472 aaKnown RBP7.75□□□□□ -1.17
CSTF3-201ENST00000323959 LY6DQ14210 128 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 GORABQ5T7V8 394 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 STAG1Q8WVM7 1258 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 PHKBQ93100 1093 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 MED8Q96G25 268 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 CRNKL1Q9BZJ0 848 aaKnown RBP7.75□□□□□ -1.17
CSTF3-201ENST00000323959 HSPBP1Q9NZL4 362 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 SEPT9Q9UHD8 586 aaPredicted RBP7.75□□□□□ -1.17
CSTF3-201ENST00000323959 NID2Q14112 1375 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 PYCARD-AS1I3L0S3 204 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 CLCN4P51793 760 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 ADAM17P78536 824 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 ODR4Q5SWX8 454 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 PI16Q6UXB8 463 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 SEPT3Q9UH03 358 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 CDH7Q9ULB5 785 aa7.75□□□□□ -1.17
CSTF3-201ENST00000323959 SMG1Q96Q15 3661 aaKnown RBP7.74□□□□□ -1.17
CSTF3-201ENST00000323959 DPP6P42658 865 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 TIMM10P62072 90 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 PLK5Q496M5 336 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 AXDND1Q5T1B0 1012 aaPredicted RBP7.74□□□□□ -1.17
CSTF3-201ENST00000323959 SMG7Q92540 1137 aaKnown RBP7.74□□□□□ -1.17
CSTF3-201ENST00000323959 MEIS3Q99687 375 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 PHF20Q9BVI0 1012 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 COPRSQ9NQ92 184 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 MCM9Q9NXL9 1143 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 APOBEC2Q9Y235 224 aaKnown RBP7.74□□□□□ -1.17
CSTF3-201ENST00000323959 HEMK1Q9Y5R4 338 aaPredicted RBP7.74□□□□□ -1.17
CSTF3-201ENST00000323959 MYH4Q9Y623 1939 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 SPAG17Q6Q759 2223 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 CCDC194A0A1B0GVG4 234 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 INPPL1O15357 1258 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 UAP1L1Q3KQV9 507 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 HSP90AB4PQ58FF6 505 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 AGMOQ6ZNB7 445 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 C16orf86Q6ZW13 317 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 MKL1Q969V6 931 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 ADAMTS10Q9H324 1103 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 ATP6V0A4Q9HBG4 840 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 TRPV5Q9NQA5 729 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 ZMYM6O95789 1325 aa7.74□□□□□ -1.17
CSTF3-201ENST00000323959 ECI2O75521 394 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 UBR5O95071 2799 aaPredicted RBP7.73□□□□□ -1.17
CSTF3-201ENST00000323959 ABCB11O95342 1321 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 ICAM1P05362 532 aa7.73□□□□□ -1.17
CSTF3-201ENST00000323959 CCDC192P0DO97 292 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms