RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 SLITRK3O94933 977 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 XRCC5P13010 732 aaKnown RBP16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 PAX7P23759 505 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 OSBPL7Q9BZF2 842 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 CCPG1Q9ULG6 757 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 IGLV3-22A0A075B6J6 115 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 FRMD3A2A2Y4 597 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 NFIBO00712 420 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 NR3C1P04150 777 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 ALAS1P13196 640 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 HPDP32754 393 aaPredicted RBP16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 GUCY2DQ02846 1103 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 KIAA0753Q2KHM9 967 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 MICALCLQ6ZW33 695 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 TLR10Q9BXR5 811 aa16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.93■□□□□ 0.3
SHROOM1-201ENST00000319854 A6NNZ2 444 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 QPCTQ16769 361 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 TUBB8Q3ZCM7 444 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 OTOP1Q7RTM1 612 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 FAXDC2Q96IV6 333 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 MBOAT7Q96N66 472 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 CEP72Q9P209 647 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 TMCO5BA8MYB1 307 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 NF2P35240 595 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 ITGB3BPQ13352 177 aaPredicted RBP16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 E2F5Q15329 346 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 HAUS2Q9NVX0 235 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 HYOU1Q9Y4L1 999 aa16.92■□□□□ 0.3
SHROOM1-201ENST00000319854 ZBTB7AO95365 584 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 FAM107AO95990 144 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 FKBP1AP62942 108 aaKnown RBP16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 IL31RAQ8NI17 732 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CYFIP2Q96F07 1278 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CCDC114Q96M63 670 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CEP63Q96MT8 703 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 ASTN2O75129 1339 aaPredicted RBP16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 TISP43B9A030 160 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 PRLRP16471 622 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 KLRC1P26715 233 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 ASIC2Q16515 512 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 EXOC3L4Q17RC7 722 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 GRIPAP1Q4V328 841 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CEP55Q53EZ4 464 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 EMC10Q5UCC4 262 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 NIM1KQ8IY84 436 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 FUKQ8N0W3 1084 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CHURC1Q8WUH1 139 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 HOOK2Q96ED9 719 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 ATP6V1G3Q96LB4 118 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 TSGA10Q9BZW7 698 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 UNC45AQ9H3U1 944 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 RAVER2Q9HCJ3 691 aaKnown RBP16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 GDF3Q9NR23 364 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 HEXIM1O94992 359 aaKnown RBP16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 TRIM49P0CI25 452 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 TRIM49CP0CI26 452 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 SP4Q02446 784 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CXCL9Q07325 125 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 ODR4Q5SWX8 454 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CYB5D1Q6P9G0 228 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 CASKIN2Q8WXE0 1202 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 WDR11Q9BZH6 1224 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 PCIF1Q9H4Z3 704 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 TPX2Q9ULW0 747 aaKnown RBP16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 ATRNL1Q5VV63 1379 aa16.91■□□□□ 0.3
SHROOM1-201ENST00000319854 WNT10BO00744 389 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 PALMO75781 387 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 EIF2AK2P19525 551 aaKnown RBP16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 TNFRSF8P28908 595 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 PTK2Q05397 1052 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 PARP9Q8IXQ6 854 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 PROCA1Q8NCQ7 364 aaPredicted RBP16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 OR2W6PQ8NHA6 318 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 RUBCNQ92622 972 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 SCLT1Q96NL6 688 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 AJAP1Q9UKB5 411 aaPredicted RBP16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 IPO5O00410 1097 aaKnown RBP16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 ATP2C2O75185 946 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 EYA4O95677 639 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 MYCLP12524 364 aaPredicted RBP16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 TCP1P17987 556 aaKnown RBP16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 HNRNPH3P31942 346 aaKnown RBP16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 RASA3Q14644 834 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 SPDYE2Q495Y8 402 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 BTNL9Q6UXG8 535 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 SYCP3Q8IZU3 236 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 LXNQ9BS40 222 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 GCNT4Q9P109 453 aa16.9■□□□□ 0.3
SHROOM1-201ENST00000319854 ASTN1O14525 1302 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 TBX3O15119 743 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 AFPP02771 609 aaKnown RBP16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 SERPING1P05155 500 aa16.89■□□□□ 0.3
SHROOM1-201ENST00000319854 TMOD1P28289 359 aa16.89■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms