RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 EFCAB12Q6NXP0 572 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 LRRC55Q6ZSA7 311 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 Q6ZUG5 572 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 METTL13Q8N6R0 699 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 PPP1R16BQ96T49 567 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 WDR81Q562E7 1941 aa16.09■□□□□ 0.17
RPP40-201ENST00000319533 TMEM221A6NGB7 291 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 M0R296 226 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 CPA1P15085 419 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 IBSPP21815 317 aaPredicted RBP16.08■□□□□ 0.16
RPP40-201ENST00000319533 NLRP11P59045 1033 aaKnown RBP16.08■□□□□ 0.16
RPP40-201ENST00000319533 KCNT2Q6UVM3 1135 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 ECHDC2Q86YB7 292 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 BICD2Q8TD16 824 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 BRF1Q92994 677 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 MAP7D2Q96T17 732 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 RIT2Q99578 217 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 RNF26Q9BY78 433 aaPredicted RBP16.08■□□□□ 0.16
RPP40-201ENST00000319533 NGRNQ9NPE2 291 aaKnown RBP16.08■□□□□ 0.16
RPP40-201ENST00000319533 NRBP2Q9NSY0 501 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 TCEAL9Q9UHQ7 104 aa16.08■□□□□ 0.16
RPP40-201ENST00000319533 PUF60Q9UHX1 559 aaKnown RBP16.08■□□□□ 0.16
RPP40-201ENST00000319533 MSH4O15457 936 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 OATP04181 439 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 ZSCAN20P17040 1043 aaPredicted RBP16.07■□□□□ 0.16
RPP40-201ENST00000319533 TMOD1P28289 359 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 HSPA4P34932 840 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 PPM1AP35813 382 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 GPC3P51654 580 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 USP11P51784 963 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 EVCP57679 992 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 FGD1P98174 961 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 TARBP2Q15633 366 aaKnown RBP16.07■□□□□ 0.16
RPP40-201ENST00000319533 ANKRD54Q6NXT1 300 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 SYCE2Q6PIF2 218 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 ZNF598Q86UK7 904 aaKnown RBP16.07■□□□□ 0.16
RPP40-201ENST00000319533 LRRC43Q8N309 656 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 SLC5A5Q92911 643 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 ZNF558Q96NG5 402 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 DISC1Q9NRI5 854 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 NAP1L2Q9ULW6 460 aaPredicted RBP16.07■□□□□ 0.16
RPP40-201ENST00000319533 AKT3Q9Y243 479 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 SNX14Q9Y5W7 946 aa16.07■□□□□ 0.16
RPP40-201ENST00000319533 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 EOMESO95936 686 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 SRGAP2BP0DMP2 458 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 DARSP14868 501 aaKnown RBP16.06■□□□□ 0.16
RPP40-201ENST00000319533 IFNAR1P17181 557 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 HOXB8P17481 243 aaPredicted RBP16.06■□□□□ 0.16
RPP40-201ENST00000319533 SFNP31947 248 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 PRKCEQ02156 737 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 BLOC1S2Q6QNY1 142 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 LRRC71Q8N4P6 559 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 CCDC148Q8NFR7 591 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 PHKBQ93100 1093 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 PBXIP1Q96AQ6 731 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 TCF25Q9BQ70 676 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 ZDBF2Q9HCK1 2354 aa16.06■□□□□ 0.16
RPP40-201ENST00000319533 HIDE1A8MVS5 230 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 RPS6KB1P23443 525 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 JAK3P52333 1124 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 KRT17Q04695 432 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 SIGLEC14Q08ET2 396 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 UGCGQ16739 394 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 CLLU1OSQ5K130 101 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 PLPP4Q5VZY2 271 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 B3GNT9Q6UX72 402 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 TRMT1LQ7Z2T5 733 aaKnown RBP16.05■□□□□ 0.16
RPP40-201ENST00000319533 SLC39A11Q8N1S5 342 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 PRSS33Q8NF86 280 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 RDM1Q8NG50 284 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 ASIC4Q96FT7 647 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 RPGRIP1Q96KN7 1286 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 JAKMIP1Q96N16 626 aaKnown RBP16.05■□□□□ 0.16
RPP40-201ENST00000319533 CEP89Q96ST8 783 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 PRRX2Q99811 253 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 TRAIPQ9BWF2 469 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 NIFKQ9BYG3 293 aaKnown RBP16.05■□□□□ 0.16
RPP40-201ENST00000319533 UNC45AQ9H3U1 944 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 SH3GLB2Q9NR46 395 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 SPG21Q9NZD8 308 aa16.05■□□□□ 0.16
RPP40-201ENST00000319533 GAS7O60861 476 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 STBD1O95210 358 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 TECP42680 631 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 CDC42EP1Q00587 391 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 AKAP17AQ02040 695 aaKnown RBP16.04■□□□□ 0.16
RPP40-201ENST00000319533 PTPN21Q16825 1174 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 Q4G0T1 1027 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 ABI1Q8IZP0 508 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 FBXL6Q8N531 539 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
RPP40-201ENST00000319533 RSPH1Q8WYR4 309 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 ENTPD7Q9NQZ7 604 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 CHST12Q9NRB3 414 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 VPS54Q9P1Q0 977 aa16.04■□□□□ 0.16
RPP40-201ENST00000319533 CYP3A7-CYP3A51PA0A087WV96 503 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 IGKV6-21A0A0C4DH24 114 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 PSMD10O75832 226 aa16.03■□□□□ 0.16
RPP40-201ENST00000319533 REC8O95072 547 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms