RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 TMBIM4Q9HC24 238 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 CLEC11AQ9Y240 323 aa8.12□□□□□ -1.11
CDHR3-201ENST00000317716 A8MUI8 341 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 DNM1LO00429 736 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ATP2A1O14983 1001 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 GAS8O95995 478 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 AFPP02771 609 aaKnown RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 TRIM49P0CI25 452 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 TRIM49CP0CI26 452 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ATF2P15336 505 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ADRA2BP18089 450 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 STAT3P40763 770 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 PPP2R5CQ13362 524 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ZYXQ15942 572 aaKnown RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 PPP1R21Q6ZMI0 780 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 TTLL6Q8N841 843 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 UBXN6Q9BZV1 441 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 PLAGL2Q9UPG8 496 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 PASKQ96RG2 1323 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 POTEB3A0JP26 581 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 CFAP69A5D8W1 941 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 POTECB2RU33 542 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 RASA4BC9J798 803 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ATMINO43313 823 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 RASA4O43374 803 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 CALUO43852 315 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ZCCHC18P0CG32 403 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 POTEJP0CG39 1038 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 CPA2P48052 419 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 MRPL12P52815 198 aaKnown RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 IL9RQ01113 521 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 PTK2Q05397 1052 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ZNF844Q08AG5 666 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 C6orf118Q5T5N4 469 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 TTI2Q6NXR4 508 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 POTEBQ6S5H4 581 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 CLEC10AQ8IUN9 316 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 GLIS3Q8NEA6 775 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 SPIRE2Q8WWL2 714 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ANKS1AQ92625 1134 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 CUEDC2Q9H467 287 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ABCA3Q99758 1704 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 TMEM120BA0PK00 339 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 POLRMTO00411 1230 aaKnown RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 PPFIA2O75334 1257 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 SHBGP04278 402 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 TROVE2P10155 538 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 DLATP10515 647 aaKnown RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 SERPINB4P48594 390 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 CACNB3P54284 484 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 AOC3Q16853 763 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 PFKFB3Q16875 520 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 DALRD3Q5D0E6 543 aaKnown RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 MFSD14BQ5SR56 506 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 SPATA21Q7Z572 469 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 C4orf33Q8N1A6 199 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 GSDMBQ8TAX9 411 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 FBXO25Q8TCJ0 367 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 TEKT4Q8WW24 435 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 TMEM237Q96Q45 408 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 KLF6Q99612 283 aaPredicted RBP8.11□□□□□ -1.11
CDHR3-201ENST00000317716 MTFR1LQ9H019 292 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 CEP72Q9P209 647 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 ZNF148Q9UQR1 794 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 FAM205AQ6ZU69 1335 aa8.11□□□□□ -1.11
CDHR3-201ENST00000317716 EXOC1LA0A1B0GW35 172 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 FOXO6A8MYZ6 492 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 TRPA1O75762 1119 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 FLT3P36888 993 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ALDH5A1P51649 535 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ELF3P78545 371 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 SYCP2LQ5T4T6 812 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ARL6IP4Q66PJ3 421 aaKnown RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 PDXDC2PQ6P474 469 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 KCTD1Q719H9 257 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ERICH1Q86X53 443 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 GIMAP8Q8ND71 665 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ZNF653Q96CK0 615 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 PIM2Q9P1W9 311 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 PARP4Q9UKK3 1724 aaKnown RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 USP15Q9Y4E8 981 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ZNF263O14978 683 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 ECEL1O95672 775 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 LDHCP07864 332 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 SERPINB6P35237 376 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 EIF3BP55884 814 aaKnown RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 EVX2Q03828 476 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 COASYQ13057 564 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 DNAJC3Q13217 504 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 SLC18A3Q16572 532 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 KYNUQ16719 465 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 FAM43BQ6ZT52 329 aaPredicted RBP8.1□□□□□ -1.11
CDHR3-201ENST00000317716 CCDC125Q86Z20 511 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 PIGOQ8TEQ8 1089 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 MAML1Q92585 1016 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 AKT1S1Q96B36 256 aa8.1□□□□□ -1.11
CDHR3-201ENST00000317716 LRRC37BQ96QE4 947 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms