RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CASP14P31944 242 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 COPB1P53618 953 aaKnown RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 ADARP55265 1226 aaKnown RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 PPP2R2AP63151 447 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 EHHADHQ08426 723 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 TROAPQ12815 778 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 UBE4AQ14139 1066 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 SCARF1Q14162 830 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 SF3B3Q15393 1217 aaKnown RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 PFKFB3Q16875 520 aaPredicted RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 MUM1Q2TAK8 710 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 TMEM67Q5HYA8 995 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 FKBP15Q5T1M5 1219 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 NEPROQ6NW34 567 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 PPP1R18Q6NYC8 613 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 ANKRD13BQ86YJ7 626 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 CCDC125Q86Z20 511 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 ZNF654Q8IZM8 581 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 SPATA5Q8NB90 893 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 CFAP61Q8NHU2 1237 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 CPLX3Q8WVH0 158 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 FAM129AQ9BZQ8 928 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 RAB17Q9H0T7 212 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 FBXL5Q9UKA1 691 aa7.18□□□□□ -1.26
ZNF540-201ENST00000316433 COL2A1P02458 1487 aaPredicted RBP7.18□□□□□ -1.26
ZNF540-201ENST00000316433 GCOM1H8Y6P7 765 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 ZNF185O15231 689 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 ASAP2O43150 1006 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 TACC1O75410 805 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 UBOX5O94941 541 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 MYZAPP0CAP1 466 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 HSPA8P11142 646 aaKnown RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 ADORA1P30542 326 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 CYP4A11Q02928 519 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 PPARDQ03181 441 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 CCDC153Q494R4 210 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 HYIQ5T013 277 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 SLC9C2Q5TAH2 1124 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 DAB2IPQ5VWQ8 1189 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 CLEC4GQ6UXB4 293 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 PROM2Q8N271 834 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 KIF2BQ8N4N8 673 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 PDCD7Q8N8D1 485 aaKnown RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 GDAP1Q8TB36 358 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 ASAP3Q8TDY4 903 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 STK32AQ8WU08 396 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 ESR2Q92731 530 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 XPO6Q96QU8 1125 aaKnown RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 TUBGCP5Q96RT8 1024 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 CGREF1Q99674 301 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 HNRNPABQ99729 332 aaKnown RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 DRC3Q9H069 523 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 BHMT2Q9H2M3 363 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 MRPL46Q9H2W6 279 aaKnown RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 TBCCD1Q9NVR7 557 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 ZSWIM5Q9P217 1185 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 CTDP1Q9Y5B0 961 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 TACC3Q9Y6A5 838 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 BAZ2AQ9UIF9 1905 aaKnown RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 BICDL2A1A5D9 508 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 KLRC4O43908 158 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 TJP3O95049 919 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 TPBGLP0DKB5 382 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 TIMM10P62072 90 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 PAK1Q13153 545 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 RCN2Q14257 317 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 WTAPQ15007 396 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 NFIL3Q16649 462 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 SH3D19Q5HYK7 790 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 WDR78Q5VTH9 848 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 MFSD6Q6ZSS7 791 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 RAB11FIP4Q86YS3 637 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 RBBP8NLQ8NC74 664 aaPredicted RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 IFT81Q8WYA0 676 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 SHISA4Q96DD7 197 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 CCDC68Q9H2F9 335 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 ABCF3Q9NUQ8 709 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 TRIM10Q9UDY6 481 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 SERTAD1Q9UHV2 236 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 NENFQ9UMX5 172 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 PLAAQ9Y263 795 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 REXO2Q9Y3B8 237 aaKnown RBP7.17□□□□□ -1.26
ZNF540-201ENST00000316433 COL4A1P02462 1669 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 MYH4Q9Y623 1939 aa7.17□□□□□ -1.26
ZNF540-201ENST00000316433 A0A0G2JLW4 131 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 PVALEFA0A1B0GWK0 134 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 MGEA5O60502 916 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 CYP1A1P04798 512 aaPredicted RBP7.16□□□□□ -1.26
ZNF540-201ENST00000316433 CHGBP05060 677 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 POTEIP0CG38 1075 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 ETS2P15036 469 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 COPS2P61201 443 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 ERVK-24P63145 666 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 SLC39A6Q13433 755 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 BIRC3Q13489 604 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 PLS1Q14651 629 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 KRT31Q15323 416 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 C10orf76Q5T2E6 689 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 HAUS3Q68CZ6 603 aa7.16□□□□□ -1.26
ZNF540-201ENST00000316433 PHLDB3Q6NSJ2 640 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms