RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SLFN12Q8IYM2 578 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 ETNPPLQ8TBG4 499 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 MBOAT7Q96N66 472 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 XPO6Q96QU8 1125 aaKnown RBP14.59□□□□□ -0.07
SKA3-202ENST00000314759 MXD3Q9BW11 206 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 ZDHHC18Q9NUE0 388 aa14.59□□□□□ -0.07
SKA3-202ENST00000314759 IGSF9BQ9UPX0 1349 aa14.58□□□□□ -0.07
SKA3-202ENST00000314759 KIF13BQ9NQT8 1826 aa14.58□□□□□ -0.07
SKA3-202ENST00000314759 FAM170AA1A519 330 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 MGRN1O60291 552 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 NEBLO76041 1014 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 EIF3BP55884 814 aaKnown RBP14.58□□□□□ -0.08
SKA3-202ENST00000314759 ELF3P78545 371 aaPredicted RBP14.58□□□□□ -0.08
SKA3-202ENST00000314759 PPATQ06203 517 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 PRPF4BQ13523 1007 aaKnown RBP14.58□□□□□ -0.08
SKA3-202ENST00000314759 DUPD1Q68J44 220 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 SLF2Q8IX21 1173 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 GLG1Q92896 1179 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 CHMP6Q96FZ7 201 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 IKZF4Q9H2S9 585 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 CNOT10Q9H9A5 744 aaKnown RBP14.58□□□□□ -0.08
SKA3-202ENST00000314759 ERVK-5Q9HDB9 667 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 DDX4Q9NQI0 724 aaKnown RBP14.58□□□□□ -0.08
SKA3-202ENST00000314759 SLC16A3O15427 465 aaKnown RBP14.58□□□□□ -0.08
SKA3-202ENST00000314759 RPA1P27694 616 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 STAT1P42224 750 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 DR1Q01658 176 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 PRR16Q569H4 304 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 MAGEC3Q8TD91 643 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 BORCS6Q96GS4 357 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 P2RX7Q99572 595 aaKnown RBP14.58□□□□□ -0.08
SKA3-202ENST00000314759 RAB17Q9H0T7 212 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 SLC24A3Q9HC58 644 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 PCDHA1Q9Y5I3 950 aa14.58□□□□□ -0.08
SKA3-202ENST00000314759 CTNND1O60716 968 aaKnown RBP14.57□□□□□ -0.08
SKA3-202ENST00000314759 SKAP2O75563 359 aaPredicted RBP14.57□□□□□ -0.08
SKA3-202ENST00000314759 ABCB4P21439 1286 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 RPL13P26373 211 aaKnown RBP14.57□□□□□ -0.08
SKA3-202ENST00000314759 PLS1Q14651 629 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 BMT2Q1RMZ1 405 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 QRICH1Q2TAL8 776 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 SPDYCQ5MJ68 293 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 CCDC50Q8IVM0 306 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 RFFLQ8WZ73 363 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 ERP44Q9BS26 406 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 FAM129AQ9BZQ8 928 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 BAIAP2L1Q9UHR4 511 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 GTPBP10A4D1E9 387 aaKnown RBP14.57□□□□□ -0.08
SKA3-202ENST00000314759 SPDYE3A6NKU9 549 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 PPIP5K2O43314 1243 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 GCNT3O95395 438 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 ATP6V1G2O95670 118 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 SOX5P35711 763 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 HIBCHQ6NVY1 386 aaPredicted RBP14.57□□□□□ -0.08
SKA3-202ENST00000314759 CENPTQ96BT3 561 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 ZNF317Q96PQ6 595 aaPredicted RBP14.57□□□□□ -0.08
SKA3-202ENST00000314759 NOD2Q9HC29 1040 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 SERPINB13Q9UIV8 391 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 ZNF831Q5JPB2 1677 aa14.57□□□□□ -0.08
SKA3-202ENST00000314759 TGFB1I1O43294 461 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 RTN2O75298 545 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 TMEM253P0C7T8 217 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 POLD1P28340 1107 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 SHMT1P34896 483 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 KLRC3Q07444 240 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 ZNF211Q13398 564 aaPredicted RBP14.56□□□□□ -0.08
SKA3-202ENST00000314759 PPP1R7Q15435 360 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 BARGINQ6ZT62 677 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 CRYGNQ8WXF5 182 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 RUSC1Q9BVN2 902 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 KDM4CQ9H3R0 1056 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 ATP6V0A4Q9HBG4 840 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 DAAM1Q9Y4D1 1078 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 NCANO14594 1321 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 MYO3BQ8WXR4 1341 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 MEIS2O14770 477 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 NUDT17P0C025 328 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 SLURP2P0DP57 97 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 CHN1P15882 459 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 ARHGAP4P98171 946 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 CYP4A11Q02928 519 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 CRYMQ14894 314 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 RNF25Q96BH1 459 aaPredicted RBP14.56□□□□□ -0.08
SKA3-202ENST00000314759 ARHGEF26Q96DR7 871 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 STAMBPL1Q96FJ0 436 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 SYT11Q9BT88 431 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 CARD9Q9H257 536 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 BHMT2Q9H2M3 363 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 ADAM7Q9H2U9 754 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 PABPC3Q9H361 631 aaKnown RBP14.56□□□□□ -0.08
SKA3-202ENST00000314759 GOPCQ9HD26 462 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 GGA1Q9UJY5 639 aa14.56□□□□□ -0.08
SKA3-202ENST00000314759 SFI1A8K8P3 1242 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 DNAJC8O75937 253 aaPredicted RBP14.55□□□□□ -0.08
SKA3-202ENST00000314759 LMNB1P20700 586 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 PMS2P54278 862 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 PLTPP55058 493 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 DRAP1Q14919 205 aaPredicted RBP14.55□□□□□ -0.08
SKA3-202ENST00000314759 NAA25Q14CX7 972 aa14.55□□□□□ -0.08
SKA3-202ENST00000314759 MSL1Q68DK7 614 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms