RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 TMEM174Q8WUU8 243 aa18.37■□□□□ 0.53
CLCF1-201ENST00000312438 SPIRE2Q8WWL2 714 aa18.37■□□□□ 0.53
CLCF1-201ENST00000312438 C16orf45Q96MC5 204 aaPredicted RBP18.37■□□□□ 0.53
CLCF1-201ENST00000312438 MMRN2Q9H8L6 949 aa18.37■□□□□ 0.53
CLCF1-201ENST00000312438 ATP6V0A4Q9HBG4 840 aa18.37■□□□□ 0.53
CLCF1-201ENST00000312438 LCTP09848 1927 aa18.37■□□□□ 0.53
CLCF1-201ENST00000312438 TNNT1P13805 278 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 KCNH2Q12809 1159 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 FAM110CQ1W6H9 321 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 CCDC62Q6P9F0 684 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 NYAP1Q6ZVC0 841 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 PPP1R13BQ96KQ4 1090 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 PCYT2Q99447 389 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 EDEM3Q9BZQ6 932 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 AGPAT5Q9NUQ2 364 aa18.36■□□□□ 0.53
CLCF1-201ENST00000312438 SOWAHDA6NJG2 315 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 CCDC169A6NNP5 214 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 SLC16A4O15374 487 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 XRCC5P13010 732 aaKnown RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 NPTX2P47972 431 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 ZNF157P51786 506 aaPredicted RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 KCNMA1Q12791 1236 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 TTLL4Q14679 1199 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 MTERF2Q49AM1 385 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 ARMCX2Q7L311 632 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 ZNF467Q7Z7K2 595 aaPredicted RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 FBXO16Q8IX29 292 aaPredicted RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 DHX37Q8IY37 1157 aaKnown RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 IKZF4Q9H2S9 585 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 AZI2Q9H6S1 392 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 FRMD4BQ9Y2L6 1034 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 PPP2R2CQ9Y2T4 447 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 KIF2AO00139 706 aaPredicted RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 TUBB4AP04350 444 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 TXNP10599 105 aaKnown RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 TCF7P36402 384 aaPredicted RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 CASP4P49662 377 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 GPR142Q7Z601 462 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 SCFD2Q8WU76 684 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 HVCN1Q96D96 273 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 BORCS6Q96GS4 357 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 KMT5AQ9NQR1 393 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 XPNPEP1Q9NQW7 623 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 ZNHIT6Q9NWK9 470 aaKnown RBP18.35■□□□□ 0.53
CLCF1-201ENST00000312438 EXOC7Q9UPT5 735 aa18.35■□□□□ 0.53
CLCF1-201ENST00000312438 MANSC4A6NHS7 340 aaPredicted RBP18.34■□□□□ 0.53
CLCF1-201ENST00000312438 NOP56O00567 594 aaKnown RBP18.34■□□□□ 0.53
CLCF1-201ENST00000312438 AFPP02771 609 aaKnown RBP18.34■□□□□ 0.53
CLCF1-201ENST00000312438 MAPK4P31152 587 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 POLGP54098 1239 aaPredicted RBP18.34■□□□□ 0.53
CLCF1-201ENST00000312438 RAD9BQ6WBX8 426 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 C12orf56Q8IXR9 622 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 FAM186BQ8IYM0 893 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 CCDC155Q8N6L0 562 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 TMEM161BQ8NDZ6 487 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 NEK11Q8NG66 645 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 IFT74Q96LB3 600 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 GPR20Q99678 358 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 FAM207AQ9NSI2 230 aaPredicted RBP18.34■□□□□ 0.53
CLCF1-201ENST00000312438 DIS3Q9Y2L1 958 aaKnown RBP18.34■□□□□ 0.53
CLCF1-201ENST00000312438 LOXHD1Q8IVV2 1947 aa18.34■□□□□ 0.53
CLCF1-201ENST00000312438 GOLGA6L9A6NEM1 432 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 ABCD1P33897 745 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 MEA1Q16626 185 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 TOGARAM2Q6ZUX3 1019 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 PLEKHH3Q7Z736 793 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 DPP9Q86TI2 863 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 RASAL3Q86YV0 1011 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 REXO1L1PQ8IX06 675 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 FAM167AQ96KS9 214 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 SPATA33Q96N06 139 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 DHX33Q9H6R0 707 aaKnown RBP18.33■□□□□ 0.53
CLCF1-201ENST00000312438 ZCCHC17Q9NP64 241 aaKnown RBP18.33■□□□□ 0.53
CLCF1-201ENST00000312438 VTA1Q9NP79 307 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 TBX20Q9UMR3 447 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 R3HCC1Q9Y3T6 440 aaKnown RBP18.33■□□□□ 0.53
CLCF1-201ENST00000312438 PPME1Q9Y570 386 aa18.33■□□□□ 0.53
CLCF1-201ENST00000312438 H0YCG3 227 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 EXOC3O60645 756 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 LGR5O75473 907 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 CCDC175P0C221 793 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 RFC5P40937 340 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 MTF1Q14872 753 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 HSDL1Q3SXM5 330 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 RGMBQ6NW40 437 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 PLPPR4Q7Z2D5 763 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 SAPCD2Q86UD0 394 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 SLC7A3Q8WY07 619 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 PDGFCQ9NRA1 345 aa18.33■□□□□ 0.52
CLCF1-201ENST00000312438 CYP2J2P51589 502 aa18.32■□□□□ 0.52
CLCF1-201ENST00000312438 GRB14Q14449 540 aa18.32■□□□□ 0.52
CLCF1-201ENST00000312438 EMC2Q15006 297 aa18.32■□□□□ 0.52
CLCF1-201ENST00000312438 TARBP2Q15633 366 aaKnown RBP18.32■□□□□ 0.52
CLCF1-201ENST00000312438 MAMDC4Q6UXC1 1216 aa18.32■□□□□ 0.52
CLCF1-201ENST00000312438 BBXQ8WY36 941 aaPredicted RBP18.32■□□□□ 0.52
CLCF1-201ENST00000312438 BSNDQ8WZ55 320 aa18.32■□□□□ 0.52
CLCF1-201ENST00000312438 GLG1Q92896 1179 aa18.32■□□□□ 0.52
CLCF1-201ENST00000312438 SLC35C1Q96A29 364 aa18.32■□□□□ 0.52
CLCF1-201ENST00000312438 CEP89Q96ST8 783 aa18.32■□□□□ 0.52
CLCF1-201ENST00000312438 ADGRG1Q9Y653 693 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms