RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 CNKSR1Q969H4 720 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 CEP95Q96GE4 821 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 COBLO75128 1261 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 PPP6R3Q5H9R7 873 aaPredicted RBP16.48■□□□□ 0.23
HCFC1-201ENST00000310441 SUCLG2Q96I99 432 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 TOPORSQ9NS56 1045 aaPredicted RBP16.48■□□□□ 0.23
HCFC1-201ENST00000310441 APOA4P06727 396 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 CEP170P1Q96L14 293 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 TMEM245Q9H330 911 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 DDX28Q9NUL7 540 aaKnown RBP16.48■□□□□ 0.23
HCFC1-201ENST00000310441 DIAPH2O60879 1101 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 SLCO1A2P46721 670 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 CENPPQ6IPU0 288 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 FAM173BQ6P4H8 233 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 ABCF3Q9NUQ8 709 aa16.48■□□□□ 0.23
HCFC1-201ENST00000310441 NOVA2Q9UNW9 492 aaKnown RBP16.48■□□□□ 0.23
HCFC1-201ENST00000310441 FGAP02671 866 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 GUCY1A3Q02108 690 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 ARMC2Q8NEN0 867 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 DDX50Q9BQ39 737 aaKnown RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 CCDC90BQ9GZT6 254 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 PFASO15067 1338 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 MAP3K19Q56UN5 1328 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 ZNF18P17022 549 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 NUDT18Q6ZVK8 323 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 STMN3Q9NZ72 180 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 RGS9BPQ6ZS82 235 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 C19orf60Q96EN9 201 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 WDR62O43379 1518 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 ZSCAN9O15535 394 aaPredicted RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 RUNX1T1Q06455 604 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 ICE2Q659A1 982 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 FOPNLQ96NB1 174 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 TGS1Q96RS0 853 aaKnown RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 LEMD3Q9Y2U8 911 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 USP19O94966 1318 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 KRT75O95678 551 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 BBS9Q3SYG4 887 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 PRUNE1Q86TP1 453 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 PLD3Q8IV08 490 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 RSPH10B2B2RC85 870 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 RSPH10BP0C881 870 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 PSMA4P25789 261 aaKnown RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 DMC1Q14565 340 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 ATP11CQ8NB49 1132 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 LSG1Q9H089 658 aaKnown RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 TCOF1Q13428 1488 aaKnown RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 LRRIQ3A6PVS8 624 aaPredicted RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 ZRANB2O95218 330 aaKnown RBP eCLIP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 MAP4P27816 1152 aaKnown RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 PDIA3P30101 505 aaKnown RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 SCRN1Q12765 414 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 EAPPQ56P03 285 aaPredicted RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 TBC1D1Q86TI0 1168 aaPredicted RBP16.47■□□□□ 0.23
HCFC1-201ENST00000310441 GANCQ8TET4 914 aa16.47■□□□□ 0.23
HCFC1-201ENST00000310441 KIF23Q02241 960 aaPredicted RBP16.46■□□□□ 0.23
HCFC1-201ENST00000310441 ABCC4O15439 1325 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 WDR91A4D1P6 747 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 ORC4O43929 436 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 MMP1P03956 469 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 EIF4A3P38919 411 aaKnown RBP16.46■□□□□ 0.23
HCFC1-201ENST00000310441 TTC17Q96AE7 1141 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 CDC42BPGQ6DT37 1551 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 RUBCNLQ9H714 662 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 CEP72Q9P209 647 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 KDM5CP41229 1560 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 GMNCA6NCL1 334 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 TOMM70O94826 608 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 RAB14P61106 215 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 GTF2IP78347 998 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 CYP4A11Q02928 519 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 TRIM69Q86WT6 500 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 BPIFA3Q9BQP9 254 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 TRAF3IP3Q9Y228 551 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 PNMA6EA0A0J9YXQ4 647 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 BTBD18B2RXH4 712 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 SUPT3HO75486 399 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 TAB3Q8N5C8 712 aaPredicted RBP16.46■□□□□ 0.23
HCFC1-201ENST00000310441 SAYSD1Q9NPB0 183 aa16.46■□□□□ 0.23
HCFC1-201ENST00000310441 CHRNA3P32297 505 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 SYDE1Q6ZW31 735 aaPredicted RBP16.46■□□□□ 0.22
HCFC1-201ENST00000310441 GINM1Q9NU53 330 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 FAM32AQ9Y421 112 aaKnown RBP16.46■□□□□ 0.22
HCFC1-201ENST00000310441 CXCR5P32302 372 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 DDIT3P35638 169 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 TSPY1Q01534 308 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 C16orf72Q14CZ0 275 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 BEND6Q5SZJ8 279 aaPredicted RBP16.46■□□□□ 0.22
HCFC1-201ENST00000310441 PARD6BQ9BYG5 372 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 WNT8AQ9H1J5 351 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 STAP1Q9ULZ2 295 aa16.46■□□□□ 0.22
HCFC1-201ENST00000310441 TERB1Q8NA31 727 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 MCPH1Q8NEM0 835 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 SNF8Q96H20 258 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 APOL6Q9BWW8 343 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 TARSL2A2RTX5 802 aaKnown RBP16.45■□□□□ 0.22
HCFC1-201ENST00000310441 K7ERI5 159 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 PPP2R2AP63151 447 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 GPIHBP1Q8IV16 184 aa16.45■□□□□ 0.22
HCFC1-201ENST00000310441 HSPH1Q92598 858 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 158.4 ms