RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 KIAA1217Q5T5P2 1943 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 SYNGAP1Q96PV0 1343 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 IGSF9BQ9UPX0 1349 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 SLC16A4O15374 487 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 ABL1P00519 1130 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 XKR3Q5GH77 459 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 SYN2Q92777 582 aaPredicted RBP23.29■■□□□ 1.32
ATG4D-201ENST00000309469 KIFAP3Q92845 792 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 GANQ9H2C0 597 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 PLCB1Q9NQ66 1216 aa23.29■■□□□ 1.32
ATG4D-201ENST00000309469 CGNQ9P2M7 1197 aaKnown RBP23.29■■□□□ 1.32
ATG4D-201ENST00000309469 SEPT9Q9UHD8 586 aaPredicted RBP23.29■■□□□ 1.32
ATG4D-201ENST00000309469 SRCAPQ6ZRS2 3230 aa23.28■■□□□ 1.32
ATG4D-201ENST00000309469 URI1O94763 535 aaPredicted RBP23.28■■□□□ 1.32
ATG4D-201ENST00000309469 PLEKP08567 350 aaPredicted RBP23.28■■□□□ 1.32
ATG4D-201ENST00000309469 UBA1P22314 1058 aaKnown RBP23.28■■□□□ 1.32
ATG4D-201ENST00000309469 APBA1Q02410 837 aa23.28■■□□□ 1.32
ATG4D-201ENST00000309469 TMEM174Q8WUU8 243 aa23.28■■□□□ 1.32
ATG4D-201ENST00000309469 MPHOSPH6Q99547 160 aaKnown RBP23.28■■□□□ 1.32
ATG4D-201ENST00000309469 MROH8Q9H579 483 aa23.28■■□□□ 1.32
ATG4D-201ENST00000309469 PDLIM7Q9NR12 457 aa23.28■■□□□ 1.32
ATG4D-201ENST00000309469 CYP26B1Q9NR63 512 aa23.28■■□□□ 1.32
ATG4D-201ENST00000309469 MAFBQ9Y5Q3 323 aaPredicted RBP23.28■■□□□ 1.32
ATG4D-201ENST00000309469 EXOC3O60645 756 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 DGAT1O75907 488 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 IPO7O95373 1038 aaKnown RBP23.27■■□□□ 1.32
ATG4D-201ENST00000309469 SLU7O95391 586 aaKnown RBP23.27■■□□□ 1.32
ATG4D-201ENST00000309469 PGK2P07205 417 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 SLC9A1P19634 815 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 SMTNP53814 917 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 KCTD2Q14681 263 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 EXOC3L4Q17RC7 722 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 DPY19L2P1Q6NXN4 242 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 MMP19Q99542 508 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 C17orf75Q9HAS0 396 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 ZNF302Q9NR11 478 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 TGFB3P10600 412 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 PON1P27169 355 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 NPTX2P47972 431 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 DMP1Q13316 513 aaPredicted RBP23.27■■□□□ 1.32
ATG4D-201ENST00000309469 ZNF569Q5MCW4 686 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 GBP6Q6ZN66 633 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 ZNF662Q6ZS27 426 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 C12orf56Q8IXR9 622 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 MCPH1Q8NEM0 835 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 ZNF526Q8TF50 670 aaPredicted RBP23.27■■□□□ 1.32
ATG4D-201ENST00000309469 NTPCRQ9BSD7 190 aaKnown RBP23.27■■□□□ 1.32
ATG4D-201ENST00000309469 HAUS4Q9H6D7 363 aa23.27■■□□□ 1.32
ATG4D-201ENST00000309469 ZNF215Q9UL58 517 aaPredicted RBP23.27■■□□□ 1.32
ATG4D-201ENST00000309469 DNAJC25-GNG10A0A024R161 153 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 GTPBP10A4D1E9 387 aaKnown RBP23.26■■□□□ 1.31
ATG4D-201ENST00000309469 CCDC169A6NNP5 214 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 EIF4A3P38919 411 aaKnown RBP23.26■■□□□ 1.31
ATG4D-201ENST00000309469 SNRPFP62306 86 aaKnown RBP23.26■■□□□ 1.31
ATG4D-201ENST00000309469 NEDD9Q14511 834 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 SFMBT2Q5VUG0 894 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 TMEM161BQ8NDZ6 487 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 SPIRE2Q8WWL2 714 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 FGD4Q96M96 766 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 MYO1AQ9UBC5 1043 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 PNMA3Q9UL41 463 aa23.26■■□□□ 1.31
ATG4D-201ENST00000309469 IGKV6D-21A0A0A0MT36 114 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 SOCS7O14512 581 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 FARP2O94887 1054 aaPredicted RBP23.25■■□□□ 1.31
ATG4D-201ENST00000309469 ACTN1P12814 892 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 ATP4AP20648 1035 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 ERVK-9P63128 1117 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 PPP2R5AQ15172 486 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 KLHDC7AQ5VTJ3 777 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 KIAA1328Q86T90 577 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 MYH11P35749 1972 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 GSTTP1A0A1W2PQM5 241 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 CYP2C8P10632 490 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 SOX10P56693 466 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 SPA17Q15506 151 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 HGSNATQ68CP4 663 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 EEPD1Q7L9B9 569 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 SHCBP1Q8NEM2 672 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 BSNDQ8WZ55 320 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 HVCN1Q96D96 273 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 ATP6V0A4Q9HBG4 840 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 KMT5AQ9NQR1 393 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 XPNPEP1Q9NQW7 623 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 TBX20Q9UMR3 447 aa23.25■■□□□ 1.31
ATG4D-201ENST00000309469 TISP43B9A030 160 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 OATP04181 439 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 RTP1P59025 263 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 MAPK8IP2Q13387 824 aaPredicted RBP23.24■■□□□ 1.31
ATG4D-201ENST00000309469 MTERF2Q49AM1 385 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 WDR78Q5VTH9 848 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 ZNF710Q8N1W2 664 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 GTF3C2Q8WUA4 911 aaPredicted RBP23.24■■□□□ 1.31
ATG4D-201ENST00000309469 ERO1AQ96HE7 468 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 DEF6Q9H4E7 631 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 PCIF1Q9H4Z3 704 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 EXOC7Q9UPT5 735 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 DOCK5Q9H7D0 1870 aa23.24■■□□□ 1.31
ATG4D-201ENST00000309469 SSU72P8A0A1W2PR75 194 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 ZNF263O14978 683 aa23.23■■□□□ 1.31
ATG4D-201ENST00000309469 TLR2O60603 784 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms