RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 NT5C3AQ9H0P0 336 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 SH2D4AQ9H788 454 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 GPRC5CQ9NQ84 441 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 STK17AQ9UEE5 414 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 GLI3P10071 1580 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 LAMB4A4D0S4 1761 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 HMGB1P1B2RPK0 211 aaPredicted RBP13.71□□□□□ -0.21
RETREG3-201ENST00000309428 ZNF131P52739 623 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 UAP1Q16222 522 aaPredicted RBP13.71□□□□□ -0.21
RETREG3-201ENST00000309428 TTMPQ5BVD1 217 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 NUGGCQ68CJ6 796 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 DEFB132Q7Z7B7 95 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 PPM1KQ8N3J5 372 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 RIOX1Q9H6W3 641 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 PRR12Q9ULL5 1215 aa13.71□□□□□ -0.21
RETREG3-201ENST00000309428 NUP188Q5SRE5 1749 aa13.71□□□□□ -0.22
RETREG3-201ENST00000309428 TTI1O43156 1089 aa13.71□□□□□ -0.22
RETREG3-201ENST00000309428 SART1O43290 800 aaKnown RBP13.71□□□□□ -0.22
RETREG3-201ENST00000309428 IL1R1P14778 569 aa13.71□□□□□ -0.22
RETREG3-201ENST00000309428 STX2P32856 288 aa13.71□□□□□ -0.22
RETREG3-201ENST00000309428 PTGISQ16647 500 aa13.71□□□□□ -0.22
RETREG3-201ENST00000309428 FAM102BQ5T8I3 360 aa13.71□□□□□ -0.22
RETREG3-201ENST00000309428 GUF1Q8N442 669 aaKnown RBP13.71□□□□□ -0.22
RETREG3-201ENST00000309428 ZNF507Q8TCN5 953 aa13.71□□□□□ -0.22
RETREG3-201ENST00000309428 EIF2AK1Q9BQI3 630 aaKnown RBP13.71□□□□□ -0.22
RETREG3-201ENST00000309428 RASSF10A6NK89 507 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 PDHA1P08559 390 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 PTK2Q05397 1052 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 FMNL3Q8IVF7 1028 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 PROM2Q8N271 834 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 SAAL1Q96ER3 474 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 FMO2Q99518 471 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 CPSF2Q9P2I0 782 aaKnown RBP13.7□□□□□ -0.22
RETREG3-201ENST00000309428 KRT5P13647 590 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 PAX7P23759 505 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 MESDQ14696 234 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 FAM182AQ5T1J6 154 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 ZNF449Q6P9G9 518 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 CASKIN2Q8WXE0 1202 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 MASTLQ96GX5 879 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 PPP1R16BQ96T49 567 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 P2RX7Q99572 595 aaKnown RBP13.7□□□□□ -0.22
RETREG3-201ENST00000309428 NKIRAS1Q9NYS0 192 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 FAM198AQ9UFP1 575 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 TPX2Q9ULW0 747 aaKnown RBP13.7□□□□□ -0.22
RETREG3-201ENST00000309428 ROBO1Q9Y6N7 1651 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 CENPFP49454 3210 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 MSH4O15457 936 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 NR3C1P04150 777 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 SLC8A1P32418 973 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 BIRC2Q13490 618 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 SPATS2Q86XZ4 545 aaKnown RBP13.7□□□□□ -0.22
RETREG3-201ENST00000309428 FAM186BQ8IYM0 893 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 FAM118BQ9BPY3 351 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 ARHGEF10LQ9HCE6 1279 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 TMOD4Q9NZQ9 345 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 DAAM1Q9Y4D1 1078 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 ITIH6Q6UXX5 1313 aa13.7□□□□□ -0.22
RETREG3-201ENST00000309428 MYH3P11055 1940 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 AKAP3O75969 853 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 ARP10275 920 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 GNPTABQ3T906 1256 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 PAPD7Q5XG87 772 aaKnown RBP13.69□□□□□ -0.22
RETREG3-201ENST00000309428 WHAMMQ8TF30 809 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 DNAJC7Q99615 494 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 L3MBTL1Q9Y468 752 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 OPLAHO14841 1288 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 POLR2MP0CAP2 368 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 PRPHP41219 470 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 NPEPPSP55786 919 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 PPP2R2AP63151 447 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 MTM1Q13496 603 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 PLA2G4FQ68DD2 849 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 CENPPQ6IPU0 288 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 MTMR9Q96QG7 549 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 LRRC27Q9C0I9 530 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 FRMD4BQ9Y2L6 1034 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 DIAPH2O60879 1101 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 POLD1P28340 1107 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 STAT1P42224 750 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 SETDB1Q15047 1291 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 HP1BP3Q5SSJ5 553 aaPredicted RBP13.69□□□□□ -0.22
RETREG3-201ENST00000309428 PDXDC1Q6P996 788 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 SH3BP5LQ7L8J4 393 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 SEC16BQ96JE7 1060 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 CUEDC2Q9H467 287 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 TAF1DQ9H5J8 278 aaPredicted RBP13.69□□□□□ -0.22
RETREG3-201ENST00000309428 PLCB1Q9NQ66 1216 aa13.69□□□□□ -0.22
RETREG3-201ENST00000309428 LRRC10BA6NIK2 292 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 AMPD2Q01433 879 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 KCNMA1Q12791 1236 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 RRP1BQ14684 758 aaKnown RBP13.68□□□□□ -0.22
RETREG3-201ENST00000309428 CC2D2BQ6DHV5 1058 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 CYP4F22Q6NT55 531 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 CYB5D1Q6P9G0 228 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 MIER3Q7Z3K6 550 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 CREG2Q8IUH2 290 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 SPIRE2Q8WWL2 714 aa13.68□□□□□ -0.22
RETREG3-201ENST00000309428 AKT1S1Q96B36 256 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms