RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 PBX4Q9BYU1 374 aa22.05■■□□□ 1.12
VEGFB-201ENST00000309422 GPR32O75388 356 aa22.04■■□□□ 1.12
VEGFB-201ENST00000309422 PHKA2P46019 1235 aa22.04■■□□□ 1.12
VEGFB-201ENST00000309422 CEBPZQ03701 1054 aaKnown RBP22.04■■□□□ 1.12
VEGFB-201ENST00000309422 FOXD4L5Q5VV16 416 aaPredicted RBP22.04■■□□□ 1.12
VEGFB-201ENST00000309422 PPP2R2DQ66LE6 453 aa22.04■■□□□ 1.12
VEGFB-201ENST00000309422 FOXD4L4Q8WXT5 416 aaPredicted RBP22.04■■□□□ 1.12
VEGFB-201ENST00000309422 YME1L1Q96TA2 773 aa22.04■■□□□ 1.12
VEGFB-201ENST00000309422 C1orf112Q9NSG2 853 aa22.04■■□□□ 1.12
VEGFB-201ENST00000309422 LRFN2Q9ULH4 789 aa22.04■■□□□ 1.12
VEGFB-201ENST00000309422 SCN5AQ14524 2016 aa22.04■■□□□ 1.12
VEGFB-201ENST00000309422 GRXCR1A8MXD5 290 aa22.03■■□□□ 1.12
VEGFB-201ENST00000309422 STAG3L1P0CL83 205 aa22.03■■□□□ 1.12
VEGFB-201ENST00000309422 DEFB103AP81534 67 aa22.03■■□□□ 1.12
VEGFB-201ENST00000309422 NCBP1Q09161 790 aaKnown RBP22.03■■□□□ 1.12
VEGFB-201ENST00000309422 FAM109BQ6ICB4 259 aaPredicted RBP22.03■■□□□ 1.12
VEGFB-201ENST00000309422 FAM117BQ6P1L5 589 aa22.03■■□□□ 1.12
VEGFB-201ENST00000309422 CABP7Q86V35 215 aa22.03■■□□□ 1.12
VEGFB-201ENST00000309422 DEFB123Q8N688 67 aa22.03■■□□□ 1.12
VEGFB-201ENST00000309422 AGO3Q9H9G7 860 aaKnown RBP22.03■■□□□ 1.12
VEGFB-201ENST00000309422 ST3GAL5Q9UNP4 418 aa22.03■■□□□ 1.12
VEGFB-201ENST00000309422 NOC2LQ9Y3T9 749 aaKnown RBP22.03■■□□□ 1.12
VEGFB-201ENST00000309422 ATP6V1DQ9Y5K8 247 aa22.03■■□□□ 1.12
VEGFB-201ENST00000309422 UPP2O95045 317 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 GJB5O95377 273 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 F13A1P00488 732 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 DARSP14868 501 aaKnown RBP22.02■■□□□ 1.12
VEGFB-201ENST00000309422 IBSPP21815 317 aaPredicted RBP22.02■■□□□ 1.12
VEGFB-201ENST00000309422 DRP2Q13474 957 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 FAM102BQ5T8I3 360 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 PADI6Q6TGC4 694 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 PRPF31Q8WWY3 499 aaKnown RBP22.02■■□□□ 1.12
VEGFB-201ENST00000309422 ZNF668Q96K58 619 aaPredicted RBP22.02■■□□□ 1.12
VEGFB-201ENST00000309422 CEP89Q96ST8 783 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 BHMT2Q9H2M3 363 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 CCDC39Q9UFE4 941 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 INSL6Q9Y581 213 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 CLIC4Q9Y696 253 aa22.02■■□□□ 1.12
VEGFB-201ENST00000309422 A0A087WZ62 844 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 PP2D1A8MPX8 630 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 ZBTB39O15060 712 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 SSBP05455 408 aaKnown RBP eCLIP22.01■■□□□ 1.11
VEGFB-201ENST00000309422 SRGAP2CP0DJJ0 459 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 RABGGTBP53611 331 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 LAMTOR4Q0VGL1 99 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.01■■□□□ 1.11
VEGFB-201ENST00000309422 CATSPER4Q7RTX7 472 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 FAM228AQ86W67 206 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 ZNF579Q8NAF0 562 aaKnown RBP22.01■■□□□ 1.11
VEGFB-201ENST00000309422 RNF149Q8NC42 400 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 RAD9AQ99638 391 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 FDXACB1Q9BRP7 624 aaPredicted RBP22.01■■□□□ 1.11
VEGFB-201ENST00000309422 POLR3FQ9H1D9 316 aaPredicted RBP22.01■■□□□ 1.11
VEGFB-201ENST00000309422 ADAMTS10Q9H324 1103 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 ERVK-5Q9HDB9 667 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 DACT1Q9NYF0 836 aa22.01■■□□□ 1.11
VEGFB-201ENST00000309422 ERLIN2O94905 339 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 PPP2R5AQ15172 486 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 PCBP1Q15365 356 aaKnown RBP eCLIP22■■□□□ 1.115e-6■■■□□ 16.4
VEGFB-201ENST00000309422 ATL3Q6DD88 541 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 FAM173BQ6P4H8 233 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 MAEAQ7L5Y9 396 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 SRGAP1Q7Z6B7 1085 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 ZBTB8OSQ8IWT0 167 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 TMEM40Q8WWA1 233 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 IFT74Q96LB3 600 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 TSPYL2Q9H2G4 693 aaPredicted RBP22■■□□□ 1.11
VEGFB-201ENST00000309422 NKX2-4Q9H2Z4 354 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 CFAP45Q9UL16 551 aa22■■□□□ 1.11
VEGFB-201ENST00000309422 EYA4O95677 639 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 MARCKSP29966 332 aaPredicted RBP21.99■■□□□ 1.11
VEGFB-201ENST00000309422 CDC25AP30304 524 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 PBX2P40425 430 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 MKRN4PQ13434 485 aaPredicted RBP21.99■■□□□ 1.11
VEGFB-201ENST00000309422 IL17AQ16552 155 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 NPAS4Q8IUM7 802 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 KRI1Q8N9T8 703 aaKnown RBP21.99■■□□□ 1.11
VEGFB-201ENST00000309422 USP28Q96RU2 1077 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 ZNF576Q9H609 170 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 CDHR5Q9HBB8 845 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 CA3P07451 260 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 CYP11B2P19099 503 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 ANP32AP39687 249 aaKnown RBP21.99■■□□□ 1.11
VEGFB-201ENST00000309422 TCTN1Q2MV58 587 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 KIFAP3Q92845 792 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 TOP1MTQ969P6 601 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 DRC1Q96MC2 740 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 ADAM2Q99965 735 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 TIPINQ9BVW5 301 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 PIN4Q9Y237 131 aaKnown RBP21.99■■□□□ 1.11
VEGFB-201ENST00000309422 PCDHB7Q9Y5E2 793 aa21.99■■□□□ 1.11
VEGFB-201ENST00000309422 SRPRBQ9Y5M8 271 aaKnown RBP21.99■■□□□ 1.11
VEGFB-201ENST00000309422 LAMA3Q16787 3333 aa21.98■■□□□ 1.11
VEGFB-201ENST00000309422 A0A087WWV3 80 aa21.98■■□□□ 1.11
VEGFB-201ENST00000309422 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.98■■□□□ 1.11
VEGFB-201ENST00000309422 LRRIQ4A6NIV6 560 aa21.98■■□□□ 1.11
VEGFB-201ENST00000309422 ENPP3O14638 875 aa21.98■■□□□ 1.11
VEGFB-201ENST00000309422 YEATS4O95619 227 aa21.98■■□□□ 1.11
VEGFB-201ENST00000309422 NASPP49321 788 aaPredicted RBP21.98■■□□□ 1.11
VEGFB-201ENST00000309422 TMEM132AQ24JP5 1023 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms