RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 SMPD1P17405 629 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 KLRC1P26715 233 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 YWHABP31946 246 aaKnown RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 THPOP40225 353 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 TTLL4Q14679 1199 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 ZFYVE27Q5T4F4 411 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 ZNF397Q8NF99 534 aaPredicted RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 DIS3LQ8TF46 1054 aaKnown RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 SLC7A3Q8WY07 619 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 RANBP17Q9H2T7 1088 aaKnown RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 TUT1Q9H6E5 874 aaKnown RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 ZNF302Q9NR11 478 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 RAB21Q9UL25 225 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 ATRNL1Q5VV63 1379 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 ZNFX1Q9P2E3 1918 aaKnown RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 NT5C1B-RDH14C9J2C7 533 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 ZNF862O60290 1169 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 SNHG28P0DPA3 235 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 AKAP5P24588 427 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 CLCN6P51797 869 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 FCGRTP55899 365 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 LACTBP83111 547 aaPredicted RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 EPC2Q52LR7 807 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 OTOP2Q7RTS6 562 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 TMC6Q7Z403 805 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 MYOCDQ8IZQ8 938 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 DNAJC5GQ8N7S2 189 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 CCDC34Q96HJ3 373 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 TIGD1Q96MW7 591 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 REEP2Q9BRK0 252 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 TARS2Q9BW92 718 aaKnown RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 SPC25Q9HBM1 224 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 PARP2Q9UGN5 583 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 EXOC3O60645 756 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 CUTAO60888 179 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 INHAP05111 366 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 ADKP55263 362 aaKnown RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 EFCAB12Q6NXP0 572 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 VSIG10LQ86VR7 867 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 CSGALNACT2Q8N6G5 542 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 MICAL1Q8TDZ2 1067 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 GLMNQ92990 594 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 ATP6V0A1Q93050 837 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 MAML3Q96JK9 1138 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 PSMB7Q99436 277 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 PSD3Q9NYI0 1048 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 KIAA1468Q9P260 1216 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 PCDHA10Q9Y5I2 948 aa5.43□□□□□ -1.54
CAST-201ENST00000309190 SRPRBQ9Y5M8 271 aaKnown RBP5.43□□□□□ -1.54
CAST-201ENST00000309190 A0A087WZ62 844 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 GRXCR2A6NFK2 248 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 I3L4J1 428 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 TREHO43280 583 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 B4GALT5O43286 388 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 CA12O43570 354 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 HIP1RO75146 1068 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 PHACTR2O75167 634 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 SLITRK3O94933 977 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 TNNI1P19237 187 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 GRK4P32298 578 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 PMS1P54277 932 aaKnown RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 TFAMQ00059 246 aaKnown RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 CACNB2Q08289 660 aaPredicted RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 FKBP15Q5T1M5 1219 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 SND1Q7KZF4 910 aaKnown RBP eCLIP5.42□□□□□ -1.54
CAST-201ENST00000309190 MICALL1Q8N3F8 863 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 DEPTORQ8TB45 409 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 POMGNT1Q8WZA1 660 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 CCDC47Q96A33 483 aaKnown RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 FDXACB1Q9BRP7 624 aaPredicted RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 PI4K2AQ9BTU6 479 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 FUT8Q9BYC5 575 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 OSBPL7Q9BZF2 842 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 ACP6Q9NPH0 428 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 NXF1Q9UBU9 619 aaKnown RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 TFR2Q9UP52 801 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 ARIH1Q9Y4X5 557 aaPredicted RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 CELSR3Q9NYQ7 3312 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 SSC5DA1L4H1 1573 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 TTLL13PA6NNM8 815 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 EDIL3O43854 480 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 FOSP01100 380 aaPredicted RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 CD58P19256 250 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 PRCPP42785 496 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 QARSP47897 775 aaKnown RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 GRB10Q13322 594 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 TWF2Q6IBS0 349 aaKnown RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 SH3RF1Q7Z6J0 888 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 PRPF31Q8WWY3 499 aaKnown RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 NELFBQ8WX92 580 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 LPPQ93052 612 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 PAWRQ96IZ0 340 aaKnown RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 MTRQ99707 1265 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 HDAC6Q9UBN7 1215 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 ZNF112Q9UJU3 913 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 TIMM13Q9Y5L4 95 aaPredicted RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 TLL2Q9Y6L7 1015 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 DENND3A2RUS2 1198 aa5.42□□□□□ -1.54
CAST-201ENST00000309190 BHMG1C9JSJ3 638 aaPredicted RBP5.42□□□□□ -1.54
CAST-201ENST00000309190 ACTN4O43707 911 aaKnown RBP5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms