RNA–Protein interactions for RNA: ENST00000308127.8

SSH3-201, Transcript of slingshot protein phosphatase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSH3, Length 2,871 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-201ENST00000308127 ZNF219Q9P2Y4 722 aaPredicted RBP18.01■□□□□ 0.47
SSH3-201ENST00000308127 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
SSH3-201ENST00000308127 DDTLA6NHG4 134 aaPredicted RBP18■□□□□ 0.47
SSH3-201ENST00000308127 CTNND1O60716 968 aaKnown RBP18■□□□□ 0.47
SSH3-201ENST00000308127 BARGINQ6ZT62 677 aa18■□□□□ 0.47
SSH3-201ENST00000308127 EPM2AIP1Q7L775 607 aaPredicted RBP18■□□□□ 0.47
SSH3-201ENST00000308127 SLF2Q8IX21 1173 aa18■□□□□ 0.47
SSH3-201ENST00000308127 OLIG1Q8TAK6 271 aa18■□□□□ 0.47
SSH3-201ENST00000308127 EIF2AK1Q9BQI3 630 aaKnown RBP18■□□□□ 0.47
SSH3-201ENST00000308127 TYW1Q9NV66 732 aaKnown RBP18■□□□□ 0.47
SSH3-201ENST00000308127 FAM13AO94988 1023 aa18■□□□□ 0.47
SSH3-201ENST00000308127 FGFR4P22455 802 aa18■□□□□ 0.47
SSH3-201ENST00000308127 C6orf89Q6UWU4 347 aa18■□□□□ 0.47
SSH3-201ENST00000308127 CCDC25Q86WR0 208 aa18■□□□□ 0.47
SSH3-201ENST00000308127 ARFGAP2Q8N6H7 521 aa18■□□□□ 0.47
SSH3-201ENST00000308127 CCDC26Q8TAB7 109 aa18■□□□□ 0.47
SSH3-201ENST00000308127 HES6Q96HZ4 224 aa18■□□□□ 0.47
SSH3-201ENST00000308127 MLXIPLQ9NP71 852 aa18■□□□□ 0.47
SSH3-201ENST00000308127 LRRC4BQ9NT99 713 aa18■□□□□ 0.47
SSH3-201ENST00000308127 DNAJC17Q9NVM6 304 aaKnown RBP18■□□□□ 0.47
SSH3-201ENST00000308127 DDX39AO00148 427 aaKnown RBP17.99■□□□□ 0.47
SSH3-201ENST00000308127 PDXKO00764 312 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 RPA1P27694 616 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 DR1Q01658 176 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 RC3H1Q5TC82 1133 aaKnown RBP17.99■□□□□ 0.47
SSH3-201ENST00000308127 PPP1R18Q6NYC8 613 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 LRIG3Q6UXM1 1119 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 RUFY4Q6ZNE9 571 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 ZC3H3Q8IXZ2 948 aaKnown RBP17.99■□□□□ 0.47
SSH3-201ENST00000308127 CTNNBL1Q8WYA6 563 aaPredicted RBP17.99■□□□□ 0.47
SSH3-201ENST00000308127 HOOK2Q96ED9 719 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 AZI2Q9H6S1 392 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 SUCLA2Q9P2R7 463 aaPredicted RBP17.99■□□□□ 0.47
SSH3-201ENST00000308127 TCRBV7S2A1N4TA0A589 114 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 PPP4R3CPQ6ZMV5 832 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 ZSWIM2Q8NEG5 633 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 FAM163AQ96GL9 167 aaPredicted RBP17.99■□□□□ 0.47
SSH3-201ENST00000308127 DYDC2Q96IM9 177 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 PSMD1Q99460 953 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 BZW2Q9Y6E2 419 aaKnown RBP17.99■□□□□ 0.47
SSH3-201ENST00000308127 MYO3BQ8WXR4 1341 aa17.99■□□□□ 0.47
SSH3-201ENST00000308127 DDX3YO15523 660 aaKnown RBP17.98■□□□□ 0.47
SSH3-201ENST00000308127 ECM2O94769 699 aaPredicted RBP17.98■□□□□ 0.47
SSH3-201ENST00000308127 PRKCIP41743 596 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 KCNJ1P48048 391 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 RINT1Q6NUQ1 792 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 OTUD6AQ7L8S5 288 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 CACNA2D3Q8IZS8 1091 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 ERMNQ8TAM6 284 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 MGARPQ8TDB4 240 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 CEP89Q96ST8 783 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 DBNDD1Q9H9R9 158 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 ZMYM2Q9UBW7 1377 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 PITPNM2Q9BZ72 1349 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 A6NNZ2 444 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 CHN1P15882 459 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 SOX5P35711 763 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 DLG4P78352 724 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 TUBB8Q3ZCM7 444 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 SLFN11Q7Z7L1 901 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 SLFN12Q8IYM2 578 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 KAT5Q92993 513 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 ZKSCAN4Q969J2 545 aaPredicted RBP17.98■□□□□ 0.47
SSH3-201ENST00000308127 RNF25Q96BH1 459 aaPredicted RBP17.98■□□□□ 0.47
SSH3-201ENST00000308127 POP1Q99575 1024 aaKnown RBP17.98■□□□□ 0.47
SSH3-201ENST00000308127 SEMA4AQ9H3S1 761 aa17.98■□□□□ 0.47
SSH3-201ENST00000308127 FOXN3O00409 490 aaPredicted RBP17.97■□□□□ 0.47
SSH3-201ENST00000308127 CFBP00751 764 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 NT5C2P49902 561 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 JAG1P78504 1218 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 SETQ01105 290 aaPredicted RBP17.97■□□□□ 0.47
SSH3-201ENST00000308127 SLC29A2Q14542 456 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 ARHGAP27Q6ZUM4 889 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 ZDHHC14Q8IZN3 488 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 EPS8L3Q8TE67 593 aaKnown RBP17.97■□□□□ 0.47
SSH3-201ENST00000308127 CALR3Q96L12 384 aaKnown RBP17.97■□□□□ 0.47
SSH3-201ENST00000308127 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.97■□□□□ 0.47
SSH3-201ENST00000308127 DAAM1Q9Y4D1 1078 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 ANKRD63C9JTQ0 380 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 G3V3G9 751 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 CCDC188H7C350 402 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 CALCAP01258 141 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 HLA-DOAP06340 250 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 TNFAIP3P21580 790 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 FMO5P49326 533 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 ADCY1Q08828 1119 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 LRRC14Q15048 493 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 ANKRD20A8PQ5CZ79 823 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 C10orf76Q5T2E6 689 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 DCAF8Q5TAQ9 597 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 PHLDB2Q86SQ0 1253 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 KIRREL3Q8IZU9 778 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 RASGEF1CQ8N431 466 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 TBC1D22AQ8WUA7 517 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 LMBR1Q8WVP7 490 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 RBM17Q96I25 401 aaKnown RBP17.97■□□□□ 0.47
SSH3-201ENST00000308127 NCAPGQ9BPX3 1015 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 EPB41L4BQ9H329 900 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 CTTNBP2NLQ9P2B4 639 aa17.97■□□□□ 0.47
SSH3-201ENST00000308127 WRAP73Q9P2S5 460 aaPredicted RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms