RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 IGHA2P01877 340 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 SMPD1P17405 629 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 CYP2B6P20813 491 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 STAT5BP51692 787 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 LRRC63Q05C16 580 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 ACVR2BQ13705 512 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 MTERF2Q49AM1 385 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 ODR4Q5SWX8 454 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 ZNF720Q7Z2F6 126 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 MSL3Q8N5Y2 521 aaKnown RBP7.69□□□□□ -1.18
PTCD2-201ENST00000308077 ZNF507Q8TCN5 953 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 STRA6Q9BX79 667 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 KCNH6Q9H252 994 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 IKZF4Q9H2S9 585 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 ABHD16BQ9H3Z7 469 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 SLC5A4Q9NY91 659 aa7.69□□□□□ -1.18
PTCD2-201ENST00000308077 LIMA1Q9UHB6 759 aaKnown RBP7.69□□□□□ -1.18
PTCD2-201ENST00000308077 EMSYQ7Z589 1322 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 LRRC10BA6NIK2 292 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 NOP56O00567 594 aaKnown RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 TNPO2O14787 897 aaKnown RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 EIF3DO15371 548 aaKnown RBP eCLIP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 TEX33O43247 280 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 CBFA2T2O43439 604 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 PPP1R37O75864 691 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 ALDH1A1P00352 501 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 GH1P01241 217 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 PLS3P13797 630 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 NR1I3Q14994 352 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 TARBP2Q15633 366 aaKnown RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 PRAMEF19Q5SWL8 479 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 FAM102BQ5T8I3 360 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 FAM160B1Q5W0V3 765 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 FOXR2Q6PJQ5 311 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 FAM178BQ8IXR5 827 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 ZC3H3Q8IXZ2 948 aaKnown RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 DRC7Q8IY82 874 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 NOC3LQ8WTT2 800 aaKnown RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 BSNDQ8WZ55 320 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 CNOT6LQ96LI5 555 aaKnown RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 ZNF830Q96NB3 372 aaPredicted RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 APBA2Q99767 749 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 TIPINQ9BVW5 301 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 NIFKQ9BYG3 293 aaKnown RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 TAB2Q9NYJ8 693 aa7.68□□□□□ -1.18
PTCD2-201ENST00000308077 ZHX1Q9UKY1 873 aaPredicted RBP7.68□□□□□ -1.18
PTCD2-201ENST00000308077 DGAT1O75907 488 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 KIF20AO95235 890 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 TBC1D8O95759 1140 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 PTMAP06454 111 aaKnown RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 ZNF865P0CJ78 1059 aaPredicted RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 MARK3P27448 753 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 CYP2C19P33261 490 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 RGS2P41220 211 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 COPB1P53618 953 aaKnown RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 SPAG1Q07617 926 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 LAMC2Q13753 1193 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 PLCB4Q15147 1175 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 KNOP1Q1ED39 458 aaKnown RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 LRIT3Q3SXY7 679 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 DUSP28Q4G0W2 176 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 OLFML2BQ68BL8 750 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 PLPPR4Q7Z2D5 763 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 TMC6Q7Z403 805 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 VSTM4Q8IW00 320 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 PPTC7Q8NI37 304 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 SOCS4Q8WXH5 440 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 EMID1Q96A84 441 aaPredicted RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 DRC1Q96MC2 740 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 TSG101Q99816 390 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 DHX33Q9H6R0 707 aaKnown RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 AZI2Q9H6S1 392 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 ATP6V0A4Q9HBG4 840 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 LARSQ9P2J5 1176 aaKnown RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 TRAF3IP3Q9Y228 551 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 SIP14410 1827 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 ZBTB42B2RXF5 422 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 K7ENM7 598 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 TGFB1I1O43294 461 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 LGALS2P05162 132 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 MAPTP10636 758 aaKnown RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 EEF1GP26641 437 aaKnown RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 PBX1P40424 430 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 PSMC4P43686 418 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 NCKAP1LP55160 1127 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 PEX3P56589 373 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 LACTBP83111 547 aaPredicted RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 EMC2Q15006 297 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 HS1BP3Q53T59 392 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 CCDC186Q7Z3E2 898 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 CREBRFQ8IUR6 639 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 AFG1LQ8WV93 481 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 GLG1Q92896 1179 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 LENG1Q96BZ8 264 aaPredicted RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 TRIM44Q96DX7 344 aaPredicted RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 POLR3FQ9H1D9 316 aaPredicted RBP7.67□□□□□ -1.18
PTCD2-201ENST00000308077 VPS16Q9H269 839 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 KCNF1Q9H3M0 494 aa7.67□□□□□ -1.18
PTCD2-201ENST00000308077 GABRQQ9UN88 632 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms