RNA–Protein interactions for RNA: ENST00000303731.8

TRAPPC1-201, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC1, Length 811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-201ENST00000303731 CTC1Q2NKJ3 1217 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 SPOUT1Q5T280 376 aaKnown RBP18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 FAM178BQ8IXR5 827 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 SPPL3Q8TCT6 385 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 NLRP7Q8WX94 980 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 GJA10Q969M2 543 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 DACT1Q9NYF0 836 aa18.72■□□□□ 0.59
TRAPPC1-201ENST00000303731 IGKV6-21A0A0C4DH24 114 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 SLC37A4O43826 429 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 CCNT1O60563 726 aaKnown RBP18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 LAG3P18627 525 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 IBSPP21815 317 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 QARSP47897 775 aaKnown RBP18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 HYAL1Q12794 435 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 MTERF2Q49AM1 385 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 EP400NLQ6ZTU2 488 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 PIK3AP1Q6ZUJ8 805 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 ZNF410Q86VK4 478 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 SLFN12Q8IYM2 578 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 GTF3C6Q969F1 213 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 GCOM2Q9BZD3 368 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 INO80BQ9C086 356 aaPredicted RBP18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 TMEM117Q9H0C3 514 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 CHST12Q9NRB3 414 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 PRKAG3Q9UGI9 489 aa18.71■□□□□ 0.59
TRAPPC1-201ENST00000303731 DDX11L8A8MPP1 907 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 H3BQ06 376 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 MARCH6O60337 910 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 MAFO75444 373 aaPredicted RBP18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 STBD1O95210 358 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 CTDNEP1O95476 244 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 P4HBP07237 508 aaKnown RBP18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 SFPQP23246 707 aaKnown RBP eCLIP18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 KRT2P35908 639 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 GATMP50440 423 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 CAMK1Q14012 370 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 FAM102BQ5T8I3 360 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 PDE12Q6L8Q7 609 aaKnown RBP18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 ABI1Q8IZP0 508 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 POF1BQ8WVV4 589 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 CEP89Q96ST8 783 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 VAV3Q9UKW4 847 aa18.7■□□□□ 0.58
TRAPPC1-201ENST00000303731 PLXNA4Q9HCM2 1894 aa18.69■□□□□ 0.58
TRAPPC1-201ENST00000303731 BAG4O95429 457 aaKnown RBP18.69■□□□□ 0.58
TRAPPC1-201ENST00000303731 EOMESO95936 686 aa18.69■□□□□ 0.58
TRAPPC1-201ENST00000303731 IL9P15248 144 aa18.69■□□□□ 0.58
TRAPPC1-201ENST00000303731 GJD3Q8N144 294 aa18.69■□□□□ 0.58
TRAPPC1-201ENST00000303731 LRRC43Q8N309 656 aa18.69■□□□□ 0.58
TRAPPC1-201ENST00000303731 LZTS1Q9Y250 596 aa18.69■□□□□ 0.58
TRAPPC1-201ENST00000303731 A0A0U1RQF3 1178 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 CARNS1A5YM72 827 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 PPM1AP35813 382 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 LTBRP36941 435 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 EPHA7Q15375 998 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 ME3Q16798 604 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 ANO5Q75V66 913 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 ECHDC2Q86YB7 292 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 THNSL1Q8IYQ7 743 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 COLGALT1Q8NBJ5 622 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 OXER1Q8TDS5 423 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 SLC7A3Q8WY07 619 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 TRAIPQ9BWF2 469 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 CYP26B1Q9NR63 512 aa18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 TYW1Q9NV66 732 aaKnown RBP18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 SUCLA2Q9P2R7 463 aaPredicted RBP18.68■□□□□ 0.58
TRAPPC1-201ENST00000303731 EML1O00423 815 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 GAS2O43903 313 aaKnown RBP18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 FGF18O76093 207 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 FGFR1P11362 822 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 SKIP12755 728 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 DNAJB1P25685 340 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 RFC5P40937 340 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 NEK4P51957 841 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 ADAM15Q13444 863 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 TRIM29Q14134 588 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 OTUD6AQ7L8S5 288 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 C4orf19Q8IY42 314 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 EFHBQ8N7U6 833 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 HAS1Q92839 578 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 POP1Q99575 1024 aaKnown RBP18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 CDCA3Q99618 268 aaPredicted RBP18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 MRPL9Q9BYD2 267 aaKnown RBP18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 IGFLR1Q9H665 355 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 CWH43Q9H720 699 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 TLR9Q9NR96 1032 aa18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 PUF60Q9UHX1 559 aaKnown RBP18.67■□□□□ 0.58
TRAPPC1-201ENST00000303731 FDPSP14324 419 aaKnown RBP18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 COL9A1P20849 921 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 SSTR3P32745 418 aaPredicted RBP18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 NDUFV1P49821 464 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 PLCB3Q01970 1234 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 DRP2Q13474 957 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 SMAD4Q13485 552 aaKnown RBP18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 SMAD2Q15796 467 aaKnown RBP18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 RHPN2Q8IUC4 686 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 NECAB1Q8N987 351 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 NSUN7Q8NE18 718 aaKnown RBP18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 CEP170P1Q96L14 293 aa18.66■□□□□ 0.58
TRAPPC1-201ENST00000303731 CASD1Q96PB1 797 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms