RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 C16orf45Q96MC5 204 aaPredicted RBP13.19□□□□□ -0.3
TPM3-202ENST00000302206 MMP19Q99542 508 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 TMEM206Q9H813 350 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 DMAC2Q9NW81 257 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 TRMT1Q9NXH9 659 aaKnown RBP13.19□□□□□ -0.3
TPM3-202ENST00000302206 ARMCX3Q9UH62 379 aaPredicted RBP13.19□□□□□ -0.3
TPM3-202ENST00000302206 KCNG1Q9UIX4 513 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 R3HCC1Q9Y3T6 440 aaKnown RBP13.19□□□□□ -0.3
TPM3-202ENST00000302206 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.19□□□□□ -0.3
TPM3-202ENST00000302206 WDR81Q562E7 1941 aa13.19□□□□□ -0.3
TPM3-202ENST00000302206 SYNGAP1Q96PV0 1343 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 RNF225M0QZC1 329 aaPredicted RBP13.18□□□□□ -0.3
TPM3-202ENST00000302206 ZNF862O60290 1169 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 USO1O60763 962 aaKnown RBP13.18□□□□□ -0.3
TPM3-202ENST00000302206 CCDC175P0C221 793 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 ZBTB48P10074 688 aaPredicted RBP13.18□□□□□ -0.3
TPM3-202ENST00000302206 EPB41P11171 864 aaKnown RBP13.18□□□□□ -0.3
TPM3-202ENST00000302206 NCKAP1LP55160 1127 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 GTF2BQ00403 316 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 SP2Q02086 613 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 Q3C1V9 767 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 SWSAP1Q6NVH7 229 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 ANO5Q75V66 913 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 C12orf56Q8IXR9 622 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 ABRAQ8N0Z2 381 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 PLCD3Q8N3E9 789 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 MCPH1Q8NEM0 835 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 SPIRE2Q8WWL2 714 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 KCNN1Q92952 543 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 FGD4Q96M96 766 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 PCMTD1Q96MG8 357 aaPredicted RBP13.18□□□□□ -0.3
TPM3-202ENST00000302206 ACCSQ96QU6 501 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 GBP3Q9H0R5 595 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 NUCKS1Q9H1E3 243 aaKnown RBP13.18□□□□□ -0.3
TPM3-202ENST00000302206 PDLIM7Q9NR12 457 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 ZNHIT6Q9NWK9 470 aaKnown RBP13.18□□□□□ -0.3
TPM3-202ENST00000302206 MORF4L1Q9UBU8 362 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 PPME1Q9Y570 386 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 MAFBQ9Y5Q3 323 aaPredicted RBP13.18□□□□□ -0.3
TPM3-202ENST00000302206 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 MYH11P35749 1972 aa13.18□□□□□ -0.3
TPM3-202ENST00000302206 MKI67P46013 3256 aaKnown RBP13.17□□□□□ -0.3
TPM3-202ENST00000302206 CCL15-CCL14A0A0B4J2E2 113 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 SOWAHDA6NJG2 315 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 NKRFO15226 690 aaKnown RBP eCLIP13.17□□□□□ -0.3
TPM3-202ENST00000302206 PEX10O60683 326 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 DGAT1O75907 488 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 TBC1D8O95759 1140 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 PSMC2P35998 433 aaKnown RBP13.17□□□□□ -0.3
TPM3-202ENST00000302206 CCL15Q16663 113 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 ZC2HC1CQ53FD0 456 aaPredicted RBP13.17□□□□□ -0.3
TPM3-202ENST00000302206 RAD9BQ6WBX8 426 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 SEPT14Q6ZU15 432 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 CCDC60Q8IWA6 550 aaPredicted RBP13.17□□□□□ -0.3
TPM3-202ENST00000302206 GPRC5AQ8NFJ5 357 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 BORCS6Q96GS4 357 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
TPM3-202ENST00000302206 BCAS3Q9H6U6 928 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 AGPAT3Q9NRZ7 376 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 ADGRG1Q9Y653 693 aa13.17□□□□□ -0.3
TPM3-202ENST00000302206 GTPBP10A4D1E9 387 aaKnown RBP13.16□□□□□ -0.3
TPM3-202ENST00000302206 ASB14A6NK59 587 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 BTBD19C9JJ37 291 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 H0YCG3 227 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 K7ENM7 598 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 PDHXO00330 501 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 MAPK13O15264 365 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 AKAP3O75969 853 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 FARP2O94887 1054 aaPredicted RBP13.16□□□□□ -0.3
TPM3-202ENST00000302206 AFPP02771 609 aaKnown RBP13.16□□□□□ -0.3
TPM3-202ENST00000302206 UBA1P22314 1058 aaKnown RBP13.16□□□□□ -0.3
TPM3-202ENST00000302206 SMTNP53814 917 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 NPEPPSP55786 919 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 MCCD1P59942 119 aaPredicted RBP13.16□□□□□ -0.3
TPM3-202ENST00000302206 PRKCEQ02156 737 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 KCNA1Q09470 495 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 KCNMA1Q12791 1236 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 UTP14CQ5TAP6 766 aaKnown RBP13.16□□□□□ -0.3
TPM3-202ENST00000302206 FAM160B1Q5W0V3 765 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 PLA2G4FQ68DD2 849 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 METTL7BQ6UX53 244 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 TOGARAM2Q6ZUX3 1019 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 CYFIP1Q7L576 1253 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 CCDC170Q8IYT3 715 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 NEK11Q8NG66 645 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 AFAP1L1Q8TED9 768 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 BRI3BPQ8WY22 251 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 SYN2Q92777 582 aaPredicted RBP13.16□□□□□ -0.3
TPM3-202ENST00000302206 CEP170P1Q96L14 293 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 NIFKQ9BYG3 293 aaKnown RBP13.16□□□□□ -0.3
TPM3-202ENST00000302206 POLD4Q9HCU8 107 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 ZNF302Q9NR11 478 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 CYP26B1Q9NR63 512 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 CEP72Q9P209 647 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 EXOC7Q9UPT5 735 aa13.16□□□□□ -0.3
TPM3-202ENST00000302206 PHLPP2Q6ZVD8 1323 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 GSTTP1A0A1W2PQM5 241 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 GPR25O00155 361 aa13.15□□□□□ -0.3
TPM3-202ENST00000302206 STRNO43815 780 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms