RNA–Protein interactions for RNA: ENST00000301764.11

DDB1-201, Transcript of damage specific DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDB1, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-201ENST00000301764 USP17L18D6R9N7 530 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L22D6RA61 530 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L17D6RBQ6 530 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L19D6RCP7 530 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L20D6RJB6 530 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 TRIM49P0CI25 452 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 TRIM49CP0CI26 452 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 ARL1P40616 181 aaPredicted RBP16.39■□□□□ 0.21
DDB1-201ENST00000301764 TPD52P55327 224 aaPredicted RBP16.39■□□□□ 0.21
DDB1-201ENST00000301764 KLC1Q07866 573 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L24Q0WX57 530 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 GRAMD1BQ3KR37 738 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 USP17L6PQ6QN14 398 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 HAUS1Q96CS2 278 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 Q9H521 79 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 L3MBTL1Q9Y468 752 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.39■□□□□ 0.21
DDB1-201ENST00000301764 HAUS5O94927 633 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 GRM4Q14833 912 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 PDXDC2PQ6P474 469 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 TUBB6Q9BUF5 446 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 PPARGC1AQ9UBK2 798 aaKnown RBP16.39■□□□□ 0.21
DDB1-201ENST00000301764 FSBPO95073 299 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 SCNN1DP51172 638 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 TROAPQ12815 778 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 CTTNQ14247 550 aaKnown RBP16.39■□□□□ 0.21
DDB1-201ENST00000301764 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 JAMLQ86YT9 394 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 SMC1BQ8NDV3 1235 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 SLC35G2Q8TBE7 412 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 POMGNT1Q8WZA1 660 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 STAMBPL1Q96FJ0 436 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 CALR3Q96L12 384 aaKnown RBP16.39■□□□□ 0.21
DDB1-201ENST00000301764 ERP44Q9BS26 406 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 MXD3Q9BW11 206 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 COMMD10Q9Y6G5 202 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 OVOS2A0A0G2JMS6 1433 aa16.39■□□□□ 0.21
DDB1-201ENST00000301764 TRPA1O75762 1119 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 RFC1P35251 1148 aaPredicted RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 CCDC14Q49A88 953 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 HSP90AA5PQ58FG0 334 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 XKR9Q5GH70 373 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 RBM26Q5T8P6 1007 aaKnown RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 EP400NLQ6ZTU2 488 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 SUPT20HQ8NEM7 779 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 CNTNAP5Q8WYK1 1306 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 GOLGA8IPA6NC78 632 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 GOLGA8JA6NMD2 632 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 CAND2O75155 1236 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 KCNJ1P48048 391 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 SLC8A3P57103 927 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 TRIM28Q13263 835 aaKnown RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 ST13P4Q8IZP2 240 aaPredicted RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 MSL3Q8N5Y2 521 aaKnown RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 FGD4Q96M96 766 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 TLR10Q9BXR5 811 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 CNOT8Q9UFF9 292 aaKnown RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 BCS1LQ9Y276 419 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 WDR17Q8IZU2 1322 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 NPHP3-ACAD11A0A0J9YXS1 232 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 TTLL1O95922 423 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 FOSP01100 380 aaPredicted RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 GCLMP48507 274 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 NAALADL2Q58DX5 795 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 FUKQ8N0W3 1084 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 PYROXD1Q8WU10 500 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 VWDEQ8N2E2 1590 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 hCG_1984214I3L0E3 225 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 PPFIA2O75334 1257 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 BASP1P80723 227 aaKnown RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 SKOR1P84550 965 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 ANKRD20A8PQ5CZ79 823 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 FBXL16Q8N461 479 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 ZNF713Q8N859 430 aaPredicted RBP16.38■□□□□ 0.21
DDB1-201ENST00000301764 CENPKQ9BS16 269 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 ANO3Q9BYT9 981 aa16.38■□□□□ 0.21
DDB1-201ENST00000301764 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 STAT3P40763 770 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 TMED1Q13445 227 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 PIP4K2CQ8TBX8 421 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 IFT122Q9HBG6 1241 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 PPP1R12AO14974 1030 aaPredicted RBP16.37■□□□□ 0.21
DDB1-201ENST00000301764 CREB3O43889 395 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 DNAAF5Q86Y56 855 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 SPICE1Q8N0Z3 855 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 C9orf72Q96LT7 481 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 FAM161BQ96MY7 647 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 GINM1Q9NU53 330 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 PPP1R1BQ9UD71 204 aaPredicted RBP16.37■□□□□ 0.21
DDB1-201ENST00000301764 hCG_2014768A0A024R1R8 64 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 GOLGA8SH3BPF8 625 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 GOLGA8MH3BSY2 632 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 KRT1P04264 644 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 KLHDC7AQ5VTJ3 777 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 TMEM154Q6P9G4 183 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 BARGINQ6ZT62 677 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 VTI1AQ96AJ9 217 aa16.37■□□□□ 0.21
DDB1-201ENST00000301764 ARHGEF10LQ9HCE6 1279 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms