RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 CEBPZQ03701 1054 aaKnown RBP23.59■■□□□ 1.37
SMCO4-201ENST00000298966 TCF15Q12870 199 aa23.59■■□□□ 1.37
SMCO4-201ENST00000298966 CBX2Q14781 532 aaPredicted RBP23.59■■□□□ 1.37
SMCO4-201ENST00000298966 NLRX1Q86UT6 975 aa23.59■■□□□ 1.37
SMCO4-201ENST00000298966 DNAJB3Q8WWF6 145 aa23.59■■□□□ 1.37
SMCO4-201ENST00000298966 USP15Q9Y4E8 981 aaPredicted RBP23.59■■□□□ 1.37
SMCO4-201ENST00000298966 CDY2AQ9Y6F7 541 aa23.59■■□□□ 1.37
SMCO4-201ENST00000298966 GRIK4Q16099 956 aa23.58■■□□□ 1.37
SMCO4-201ENST00000298966 NEK8Q86SG6 692 aa23.58■■□□□ 1.37
SMCO4-201ENST00000298966 NPAS4Q8IUM7 802 aa23.58■■□□□ 1.37
SMCO4-201ENST00000298966 KLHL23Q8NBE8 558 aa23.58■■□□□ 1.37
SMCO4-201ENST00000298966 POF1BQ8WVV4 589 aa23.58■■□□□ 1.37
SMCO4-201ENST00000298966 PHF7Q9BWX1 381 aaPredicted RBP23.58■■□□□ 1.37
SMCO4-201ENST00000298966 FTHL17Q9BXU8 183 aa23.58■■□□□ 1.37
SMCO4-201ENST00000298966 IRF2BPLQ9H1B7 796 aa23.58■■□□□ 1.37
SMCO4-201ENST00000298966 RPLP2P05387 115 aaKnown RBP23.57■■□□□ 1.36
SMCO4-201ENST00000298966 STAG3L1P0CL83 205 aa23.57■■□□□ 1.36
SMCO4-201ENST00000298966 SIGLEC14Q08ET2 396 aa23.57■■□□□ 1.36
SMCO4-201ENST00000298966 PAN2Q504Q3 1202 aaKnown RBP23.57■■□□□ 1.36
SMCO4-201ENST00000298966 XRRA1Q6P2D8 792 aa23.57■■□□□ 1.36
SMCO4-201ENST00000298966 RBM23Q86U06 439 aaKnown RBP23.57■■□□□ 1.36
SMCO4-201ENST00000298966 ERAP1Q9NZ08 941 aa23.57■■□□□ 1.36
SMCO4-201ENST00000298966 BARX2Q9UMQ3 279 aaPredicted RBP23.57■■□□□ 1.36
SMCO4-201ENST00000298966 GFRA3O60609 400 aa23.56■■□□□ 1.36
SMCO4-201ENST00000298966 CUTAO60888 179 aa23.56■■□□□ 1.36
SMCO4-201ENST00000298966 CD52P31358 61 aa23.56■■□□□ 1.36
SMCO4-201ENST00000298966 MRPS6P82932 125 aaKnown RBP23.56■■□□□ 1.36
SMCO4-201ENST00000298966 GSE1Q14687 1217 aa23.56■■□□□ 1.36
SMCO4-201ENST00000298966 EARS2Q5JPH6 523 aaKnown RBP23.56■■□□□ 1.36
SMCO4-201ENST00000298966 PCNX4Q63HM2 1172 aa23.56■■□□□ 1.36
SMCO4-201ENST00000298966 ARL6IP4Q66PJ3 421 aaKnown RBP23.56■■□□□ 1.36
SMCO4-201ENST00000298966 CAVIN1Q6NZI2 390 aaKnown RBP23.56■■□□□ 1.36
SMCO4-201ENST00000298966 KRI1Q8N9T8 703 aaKnown RBP23.56■■□□□ 1.36
SMCO4-201ENST00000298966 ZNF579Q8NAF0 562 aaKnown RBP23.56■■□□□ 1.36
SMCO4-201ENST00000298966 LINC01599Q8WXQ3 324 aa23.56■■□□□ 1.36
SMCO4-201ENST00000298966 RPGRIP1Q96KN7 1286 aa23.56■■□□□ 1.36
SMCO4-201ENST00000298966 AGO3Q9H9G7 860 aaKnown RBP23.56■■□□□ 1.36
SMCO4-201ENST00000298966 PCDHB6Q9Y5E3 794 aa23.56■■□□□ 1.36
SMCO4-201ENST00000298966 MBLAC1A4D2B0 266 aaPredicted RBP23.55■■□□□ 1.36
SMCO4-201ENST00000298966 GLP2RO95838 553 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 GCFC2P16383 781 aaKnown RBP23.55■■□□□ 1.36
SMCO4-201ENST00000298966 MARK3P27448 753 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 IER5Q5VY09 327 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 RASGRP4Q8TDF6 673 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 SEPT1Q8WYJ6 367 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 GLG1Q92896 1179 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 PGBD1Q96JS3 809 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 TLE6Q9H808 572 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 FAM86C1Q9NVL1 165 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 PCDHA7Q9UN72 937 aa23.55■■□□□ 1.36
SMCO4-201ENST00000298966 PLXNA4Q9HCM2 1894 aa23.54■■□□□ 1.36
SMCO4-201ENST00000298966 SPDYE3A6NKU9 549 aa23.54■■□□□ 1.36
SMCO4-201ENST00000298966 ATP2C1P98194 919 aaPredicted RBP23.54■■□□□ 1.36
SMCO4-201ENST00000298966 JAKMIP3Q5VZ66 844 aa23.54■■□□□ 1.36
SMCO4-201ENST00000298966 MOXD1Q6UVY6 613 aa23.54■■□□□ 1.36
SMCO4-201ENST00000298966 RTN4RL1Q86UN2 441 aaPredicted RBP23.54■■□□□ 1.36
SMCO4-201ENST00000298966 FAM49AQ9H0Q0 323 aaPredicted RBP23.54■■□□□ 1.36
SMCO4-201ENST00000298966 SQORQ9Y6N5 450 aa23.54■■□□□ 1.36
SMCO4-201ENST00000298966 LOXHD1Q8IVV2 1947 aa23.54■■□□□ 1.36
SMCO4-201ENST00000298966 PTPRZ1P23471 2315 aaPredicted RBP23.54■■□□□ 1.36
SMCO4-201ENST00000298966 FAM205CA6NFA0 338 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 M0QZ92 97 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 MEIS2O14770 477 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 ATF7P17544 494 aaPredicted RBP23.53■■□□□ 1.36
SMCO4-201ENST00000298966 CMA1P23946 247 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 USP11P51784 963 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 IGBP1P78318 339 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 INF2Q27J81 1249 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 CCDC73Q6ZRK6 1079 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 CRIPAKQ8N1N5 446 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 MICAL1Q8TDZ2 1067 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 TBCKQ8TEA7 893 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 MRPS27Q92552 414 aaKnown RBP23.53■■□□□ 1.36
SMCO4-201ENST00000298966 ATOH1Q92858 354 aaPredicted RBP23.53■■□□□ 1.36
SMCO4-201ENST00000298966 CDHR1Q96JP9 859 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 GZF1Q9H116 711 aaPredicted RBP23.53■■□□□ 1.36
SMCO4-201ENST00000298966 SMARCAD1Q9H4L7 1026 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 DDX19AQ9NUU7 478 aaKnown RBP23.53■■□□□ 1.36
SMCO4-201ENST00000298966 LRFN2Q9ULH4 789 aa23.53■■□□□ 1.36
SMCO4-201ENST00000298966 SRPRBQ9Y5M8 271 aaKnown RBP23.53■■□□□ 1.36
SMCO4-201ENST00000298966 USP34Q70CQ2 3546 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 GSTTP1A0A1W2PQM5 241 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 FSD2A1L4K1 749 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 RRN3P2A6NIE6 340 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 ATP2B1P20020 1258 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 AVPR2P30518 371 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 PRPHP41219 470 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 VCPP55072 806 aaKnown RBP23.52■■□□□ 1.36
SMCO4-201ENST00000298966 MARCH8Q5T0T0 291 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 PPP4R3AQ6IN85 833 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 GPRASP2Q96D09 838 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 ANO3Q9BYT9 981 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 TMEM63CQ9P1W3 806 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 TRPV2Q9Y5S1 764 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 SPTBN4Q9H254 2564 aa23.52■■□□□ 1.36
SMCO4-201ENST00000298966 LETM1O95202 739 aaPredicted RBP23.51■■□□□ 1.35
SMCO4-201ENST00000298966 UBE3AQ05086 875 aa23.51■■□□□ 1.35
SMCO4-201ENST00000298966 PAK2Q13177 524 aa23.51■■□□□ 1.35
SMCO4-201ENST00000298966 AXDND1Q5T1B0 1012 aaPredicted RBP23.51■■□□□ 1.35
SMCO4-201ENST00000298966 USP17L6PQ6QN14 398 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms