RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 NUDT17P0C025 328 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 HIBADHP31937 336 aaKnown RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 STAT1P42224 750 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 KLRC3Q07444 240 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 SLMAPQ14BN4 828 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 DIXDC1Q155Q3 683 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 SBK1Q52WX2 424 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 EGFL6Q8IUX8 553 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 CCDC105Q8IYK2 499 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 ARHGEF2Q92974 986 aaKnown RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 NAP1L3Q99457 506 aaPredicted RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 ETNK1Q9HBU6 452 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 ZDHHC18Q9NUE0 388 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 CHORDC1Q9UHD1 332 aaPredicted RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 DDX25Q9UHL0 483 aaKnown RBP11.1□□□□□ -0.63
LMX1A-201ENST00000294816 STXBP5LQ9Y2K9 1186 aa11.1□□□□□ -0.63
LMX1A-201ENST00000294816 RPL21P46778 160 aaKnown RBP11.09□□□□□ -0.63
LMX1A-201ENST00000294816 ARHGAP44Q17R89 818 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 DCAF12L1Q5VU92 463 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 FAM47EQ6ZV65 393 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 C3orf67Q6ZVT6 689 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 SPATA21Q7Z572 469 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 CCDC24Q8N4L8 307 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 ACSBG1Q96GR2 724 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 HES6Q96HZ4 224 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 EYA3Q99504 573 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 LZTS2Q9BRK4 669 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 ADAM22Q9P0K1 906 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 TBK1Q9UHD2 729 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 MINPP1Q9UNW1 487 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 PLCH1Q4KWH8 1693 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 USP17L5A8MUK1 530 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 MEIS1O00470 390 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 KIAA0391O15091 583 aaKnown RBP11.09□□□□□ -0.63
LMX1A-201ENST00000294816 CASP5P51878 434 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 ZDHHC24Q6UX98 284 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 VSIG1Q86XK7 387 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 COL23A1Q86Y22 540 aaPredicted RBP11.09□□□□□ -0.63
LMX1A-201ENST00000294816 FBF1Q8TES7 1133 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 TRIM7Q9C029 511 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 CPSF2Q9P2I0 782 aaKnown RBP11.09□□□□□ -0.63
LMX1A-201ENST00000294816 IGSF9BQ9UPX0 1349 aa11.09□□□□□ -0.63
LMX1A-201ENST00000294816 SMIM24O75264 130 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 BRD2P25440 801 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 STX2P32856 288 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 STAT3P40763 770 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 KCNJ1P48048 391 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 ZNF131P52739 623 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 MXRA7P84157 204 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 MAPK7Q13164 816 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 AUHQ13825 339 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 TNIP1Q15025 636 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 RBBP5Q15291 538 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 TMEM119Q4V9L6 283 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 CELF1Q92879 486 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 ARHGEF26Q96DR7 871 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 SPZ1Q9BXG8 430 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 RPTORQ8N122 1335 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 FAM187AA6NFU0 413 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 TNFAIP3P21580 790 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 CASP4P49662 377 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 CTCFP49711 727 aaPredicted RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 POU5F1Q01860 360 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 RNASELQ05823 741 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 CDCA2Q69YH5 1023 aaPredicted RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 SEPT14Q6ZU15 432 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 INTS8Q75QN2 995 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 EXOC3L1Q86VI1 746 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 FITM2Q8N6M3 262 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 DDX23Q9BUQ8 820 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 TXLNGYQ9BZA5 131 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 TAOK3Q9H2K8 898 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 CTTNBP2NLQ9P2B4 639 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 KLHL14Q9P2G3 628 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 CTNNAL1Q9UBT7 734 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 ARL2BPQ9Y2Y0 163 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 UBR2Q8IWV8 1755 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 LUC7L3O95232 432 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 RAD23BP54727 409 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 PABPC4Q13310 644 aaKnown RBP eCLIP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 ERFEQ4G0M1 354 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 SLFN11Q7Z7L1 901 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 LNX1Q8TBB1 728 aaPredicted RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 RFFLQ8WZ73 363 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 ALG3Q92685 438 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 NAF1Q96HR8 494 aaKnown RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 RMDN2Q96LZ7 410 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 LBHD1Q9BQE6 289 aaPredicted RBP11.08□□□□□ -0.64
LMX1A-201ENST00000294816 ZFATQ9P243 1243 aa11.08□□□□□ -0.64
LMX1A-201ENST00000294816 POTEFA5A3E0 1075 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 BHMG1C9JSJ3 638 aaPredicted RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 RIPK2O43353 540 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 LRRN2O75325 713 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 GH1P01241 217 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 POTEIP0CG38 1075 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 ZBTB48P10074 688 aaPredicted RBP11.07□□□□□ -0.64
LMX1A-201ENST00000294816 GBP1P32455 592 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 ABL2P42684 1182 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 SNX1Q13596 522 aa11.07□□□□□ -0.64
LMX1A-201ENST00000294816 PDIA5Q14554 519 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms