RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 ZSCAN26Q16670 478 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 ZSWIM2Q8NEG5 633 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 TSKSQ9UJT2 592 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 ZNF536O15090 1300 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 ASTN2O75129 1339 aaPredicted RBP17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 SP4Q02446 784 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 BORCS6Q96GS4 357 aa17.22■□□□□ 0.35
NCKIPSD-201ENST00000294129 ICAM1P05362 532 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 H2AFZP0C0S5 128 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 USP8P40818 1118 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 MYL7Q01449 175 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 ITGB3BPQ13352 177 aaPredicted RBP17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 STXBP4Q6ZWJ1 553 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 H2AFVQ71UI9 128 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 DAAM2Q86T65 1068 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 TSEN2Q8NCE0 465 aaKnown RBP17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 MYOZ2Q9NPC6 264 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 OSGEPQ9NPF4 335 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 BZW2Q9Y6E2 419 aaKnown RBP17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 TESPA1A2RU30 521 aaPredicted RBP17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 GOLGA8IPA6NC78 632 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 GOLGA8JA6NMD2 632 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 AGPSO00116 658 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 MTMR1Q13613 665 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 PRAMEF18Q5VWM3 479 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 TAAR1Q96RJ0 339 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 RABEP2Q9H5N1 569 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 ZHX2Q9Y6X8 837 aa17.21■□□□□ 0.35
NCKIPSD-201ENST00000294129 ZC3H4Q9UPT8 1303 aaKnown RBP17.21■□□□□ 0.34
NCKIPSD-201ENST00000294129 PPARDQ03181 441 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 TNIP1Q15025 636 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 PLA2G4FQ68DD2 849 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 PEX26Q7Z412 305 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 PRPF38AQ8NAV1 312 aaKnown RBP17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 ELMO3Q96BJ8 720 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 CAMKK2Q96RR4 588 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 PSMD1Q99460 953 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 CBWD1Q9BRT8 395 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 INTS2Q9H0H0 1204 aaKnown RBP17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 VIPAS39Q9H9C1 493 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 SYNPO2Q9UMS6 1093 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 F8VZ95 297 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 FAM153BP0C7A2 387 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 KCNA3P22001 575 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 PTGER2P43116 358 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 JAM2P57087 298 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 MAPK7Q13164 816 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 MTMR2Q13614 643 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 TKFCQ3LXA3 575 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 FAM153CQ494X1 144 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 LEKR1Q6ZMV7 388 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 AEBP2Q6ZN18 517 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 AFAP1L1Q8TED9 768 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 CLEC4DQ8WXI8 215 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 FAM153AQ9UHL3 310 aa17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 COL2A1P02458 1487 aaPredicted RBP17.2■□□□□ 0.34
NCKIPSD-201ENST00000294129 KIF4AO95239 1232 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 SOX5P35711 763 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 GCLMP48507 274 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 GALCP54803 685 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 NPEPPSP55786 919 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 RPS6P62753 249 aaKnown RBP17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 MRPS9P82933 396 aaKnown RBP17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 UGCGQ16739 394 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 NAA35Q5VZE5 725 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 ZNF572Q7Z3I7 529 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 ADAT2Q7Z6V5 191 aaKnown RBP17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 KIFC3Q9BVG8 833 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 CHORDC1Q9UHD1 332 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 PEX3P56589 373 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 SPP2Q13103 211 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 RUFY1Q96T51 708 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 ODF2LQ9ULJ1 636 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 SLC16A4O15374 487 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 RAD51CO43502 376 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 FERP16591 822 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 ZNF131P52739 623 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 ITIH3Q06033 890 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 BFSP1Q12934 665 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 PRPF4BQ13523 1007 aaKnown RBP17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 HLTFQ14527 1009 aaKnown RBP eCLIP17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 TTC19Q6DKK2 380 aaPredicted RBP17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 PALB2Q86YC2 1186 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 TPCN2Q8NHX9 752 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 WNK4Q96J92 1243 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 TAS2R14Q9NYV8 317 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 SEL1LQ9UBV2 794 aa17.19■□□□□ 0.34
NCKIPSD-201ENST00000294129 EMSYQ7Z589 1322 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 ATAD5Q96QE3 1844 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 TULP2O00295 520 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 ATP9AO75110 1047 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 KRT13P13646 458 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 AARSP49588 968 aaKnown RBP eCLIP17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 HSD17B4P51659 736 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 EPHB4P54760 987 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 FAM83AQ86UY5 434 aa17.18■□□□□ 0.34
NCKIPSD-201ENST00000294129 IFT20Q8IY31 132 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms