RNA–Protein interactions for RNA: ENST00000291535.11

UBASH3A-201, Transcript of ubiquitin associated and SH3 domain containing A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBASH3A, Length 2,005 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBASH3A-201ENST00000291535 REEP2Q9BRK0 252 aa13.21□□□□□ -0.29
UBASH3A-201ENST00000291535 TMEM109Q9BVC6 243 aa13.21□□□□□ -0.29
UBASH3A-201ENST00000291535 GLT8D2Q9H1C3 349 aa13.21□□□□□ -0.29
UBASH3A-201ENST00000291535 OSGEPQ9NPF4 335 aa13.21□□□□□ -0.29
UBASH3A-201ENST00000291535 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
UBASH3A-201ENST00000291535 PNMA2Q9UL42 364 aa13.21□□□□□ -0.29
UBASH3A-201ENST00000291535 SLC12A4Q9UP95 1085 aa13.21□□□□□ -0.29
UBASH3A-201ENST00000291535 USP17L10C9JJH3 530 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 KIAA0391O15091 583 aaKnown RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 KIF1CO43896 1103 aaKnown RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 EVI5O60447 810 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 SHBGP04278 402 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 KRT18P05783 430 aaKnown RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 LMNB1P20700 586 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 RPL13P26373 211 aaKnown RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 RPA1P27694 616 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 ELF1P32519 619 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 PPARDQ03181 441 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 DHX34Q14147 1143 aaKnown RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 ITIH4Q14624 930 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 NFIL3Q16649 462 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 GPATCH4Q5T3I0 446 aaKnown RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 TLDC1Q6P9B6 456 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 GJB7Q6PEY0 223 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 CCDC197Q8NCU1 140 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 RNF25Q96BH1 459 aaPredicted RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 CNOT7Q9UIV1 285 aaKnown RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 ATP8A1Q9Y2Q0 1164 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 MYO3BQ8WXR4 1341 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 TBX3O15119 743 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 SOX5P35711 763 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 STAT1P42224 750 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 PTGIRP43119 386 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 ELF3P78545 371 aaPredicted RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 DR1Q01658 176 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 CLEC10AQ8IUN9 316 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 GPR101Q96P66 508 aaPredicted RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 NAP1L3Q99457 506 aaPredicted RBP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 STK33Q9BYT3 514 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 GPR88Q9GZN0 384 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 ERVK-5Q9HDB9 667 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 FRMPD4Q14CM0 1322 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 IGSF9BQ9UPX0 1349 aa13.2□□□□□ -0.3
UBASH3A-201ENST00000291535 TGFB1I1O43294 461 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 CHN1P15882 459 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 SLC8A1P32418 973 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 PMS2P54278 862 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 HADHBP55084 474 aaKnown RBP13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 KCNQ4P56696 695 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 EN1Q05925 392 aaPredicted RBP13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 TCEAL1Q15170 157 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 CLUL1Q15846 466 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 DCAF17Q5H9S7 520 aaPredicted RBP13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 CHADLQ6NUI6 762 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 DPP8Q6V1X1 898 aaPredicted RBP13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 NEK9Q8TD19 979 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 LENG9Q96B70 501 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 GRHL1Q9NZI5 618 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 DNM3Q9UQ16 869 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 DAAM1Q9Y4D1 1078 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 PCDHA3Q9Y5H8 950 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 GREB1LQ9C091 1923 aaPredicted RBP13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 RPTORQ8N122 1335 aa13.19□□□□□ -0.3
UBASH3A-201ENST00000291535 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L15C9J2P7 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L13C9JLJ4 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L11C9JVI0 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L18D6R9N7 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L22D6RA61 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L17D6RBQ6 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L19D6RCP7 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L20D6RJB6 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 VCAM1P19320 739 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L24Q0WX57 530 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 MAPK7Q13164 816 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 RIPK1Q13546 671 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 KIAA1755Q5JYT7 1200 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 USP17L6PQ6QN14 398 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 COL23A1Q86Y22 540 aaPredicted RBP13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 JAMLQ86YT9 394 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 GLYCTKQ8IVS8 523 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 SLF2Q8IX21 1173 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 GIMAP7Q8NHV1 300 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 ALG3Q92685 438 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 GLG1Q92896 1179 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 ATP6V0A4Q9HBG4 840 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 OLFML3Q9NRN5 406 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 SPDYE3A6NKU9 549 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 OPLAHO14841 1288 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 MMEP08473 750 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 CHRM1P11229 460 aaPredicted RBP13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 SLC16A2P36021 539 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 BAG6P46379 1132 aa13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 EIF6P56537 245 aaKnown RBP13.18□□□□□ -0.3
UBASH3A-201ENST00000291535 GPSM2P81274 684 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms