RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 CCDC68Q9H2F9 335 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 DIS3Q9Y2L1 958 aaKnown RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 A0A1B0GTH6 734 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 EIF2AK2P19525 551 aaKnown RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 FOXO4P98177 505 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 TC2NQ8N9U0 490 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 ATP6V0A1Q93050 837 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 AK9Q5TCS8 1911 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 USP17L10C9JJH3 530 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 ESRRGP62508 458 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 TMEM259Q4ZIN3 620 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 SYCP2LQ5T4T6 812 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 ATG16L1Q676U5 607 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 CAPRIN2Q6IMN6 1127 aaKnown RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 INTS2Q9H0H0 1204 aaKnown RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 USP21Q9UK80 565 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 CDC42BPAQ5VT25 1732 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 TARSL2A2RTX5 802 aaKnown RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 ZBED1O96006 694 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 SRGAP2CP0DJJ0 459 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 TSTA3Q13630 321 aaPredicted RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 CCDC137Q6PK04 289 aaKnown RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 TLK1Q9UKI8 766 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 PLEKHG1Q9ULL1 1385 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 GSG1L2A8MUP6 293 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 CTIFO43310 598 aaKnown RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 FTLP02792 175 aaPredicted RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 RSBN1LQ6PCB5 846 aaPredicted RBP16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 IL17RAQ96F46 866 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 CCDC17Q96LX7 622 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 EPN3Q9H201 632 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
SHROOM4-201ENST00000289292 MDH1P40925 334 aaKnown RBP16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 GLYCTKQ8IVS8 523 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 SLC7A3Q8WY07 619 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 FAM161BQ96MY7 647 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 SNX12Q9UMY4 172 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 TCP11X1B4DZS4 312 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 TJP3O95049 919 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 CCND2P30279 289 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 LRRC37BQ96QE4 947 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 MIS12Q9H081 205 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 CXorf56Q9H5V9 222 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 SENP2Q9HC62 589 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 MADDQ8WXG6 1647 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 MSTO1Q9BUK6 570 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 KLHL11Q9NVR0 708 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 ABCC3O15438 1527 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 WDR46O15213 610 aaKnown RBP16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 HSPA4LO95757 839 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 NOP14P78316 857 aaKnown RBP16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 NR1I3Q14994 352 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 ARHGAP31Q2M1Z3 1444 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 ERICH1Q86X53 443 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 TRIML2Q8N7C3 387 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 ABCB11O95342 1321 aa16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 HABP4Q5JVS0 413 aaKnown RBP16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
SHROOM4-201ENST00000289292 APBA3O96018 575 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 TRIM49P0CI25 452 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 TRIM49CP0CI26 452 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 CHN1P15882 459 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 PDIK1LQ8N165 341 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 ZNF277Q9NRM2 450 aaPredicted RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 EIF3HO15372 352 aaKnown RBP eCLIP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 SLC16A4O15374 487 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 EPHB1P54762 984 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 ATP2C1P98194 919 aaPredicted RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 NOA1Q8NC60 698 aaKnown RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 C11orf70Q9BRQ4 267 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 BAG5Q9UL15 447 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 CDC42BPGQ6DT37 1551 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 GSTA4O15217 222 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 TTI1O43156 1089 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 NBPF9Q3BBW0 867 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 Q3C1V9 767 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 RASGRP2Q7LDG7 609 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 SLC17A8Q8NDX2 589 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 RBM12Q9NTZ6 932 aaKnown RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 ADAM22Q9P0K1 906 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 ENO4A6NNW6 628 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 MED7O43513 233 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 KRT14P02533 472 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 THOC5Q13769 683 aaKnown RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 KNOP1Q1ED39 458 aaKnown RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 ZBED8Q8IZ13 594 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 PROM2Q8N271 834 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 SRBD1Q8N5C6 995 aaKnown RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 CCDC138Q96M89 665 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 TTC1Q99614 292 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 HAUS5O94927 633 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 CDR2Q01850 454 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 DPYDQ12882 1025 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 ZBTB17Q13105 803 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 PPP6R3Q5H9R7 873 aaPredicted RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 RAB44Q7Z6P3 723 aaPredicted RBP16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 RMDN2Q96LZ7 410 aa16.4■□□□□ 0.22
SHROOM4-201ENST00000289292 SLC13A1Q9BZW2 595 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms