RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 GTF3C2Q8WUA4 911 aaPredicted RBP19.9■□□□□ 0.78
PCDH1-201ENST00000287008 VCXQ9H320 206 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 PYCARDQ9ULZ3 195 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 MOCS3O95396 460 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 VAMP7P51809 220 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 XKR3Q5GH77 459 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 SLC10A5Q5PT55 438 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 CYFIP1Q7L576 1253 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 SAMD7Q7Z3H4 446 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 NDUFAF2Q8N183 169 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 CNOT8Q9UFF9 292 aaKnown RBP19.9■□□□□ 0.78
PCDH1-201ENST00000287008 SOWAHDA6NJG2 315 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 DPYSL4O14531 572 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 RNF219Q5W0B1 726 aaPredicted RBP19.9■□□□□ 0.78
PCDH1-201ENST00000287008 RAB44Q7Z6P3 723 aaPredicted RBP19.9■□□□□ 0.78
PCDH1-201ENST00000287008 SEPT1Q8WYJ6 367 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 EPB41L5Q9HCM4 733 aa19.9■□□□□ 0.78
PCDH1-201ENST00000287008 PP2D1A8MPX8 630 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 LGALS16A8MUM7 142 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 GOLGA8KD6RF30 607 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 CXCR5P32302 372 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 PRCPP42785 496 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 TFDP2Q14188 446 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 DCLK2Q8N568 766 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 PRR12Q9ULL5 1215 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 LAMC1P11047 1609 aa19.89■□□□□ 0.78
PCDH1-201ENST00000287008 CCL15-CCL14A0A0B4J2E2 113 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 TRIM49BA6NDI0 452 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 F8W8V4 182 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 ZNF500O60304 480 aaPredicted RBP19.89■□□□□ 0.77
PCDH1-201ENST00000287008 CCL15Q16663 113 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 KRT39Q6A163 491 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 TLK1Q9UKI8 766 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 IQSEC2Q5JU85 1478 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 CDC42BPBQ9Y5S2 1711 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 NAALADL2Q58DX5 795 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 LRRC31Q6UY01 552 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 RPUSD2Q8IZ73 545 aaKnown RBP19.89■□□□□ 0.77
PCDH1-201ENST00000287008 STRIP2Q9ULQ0 834 aa19.89■□□□□ 0.77
PCDH1-201ENST00000287008 MAGED2Q9UNF1 606 aaPredicted RBP19.89■□□□□ 0.77
PCDH1-201ENST00000287008 EYA4O95677 639 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 CYP2B6P20813 491 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 ATP2C1P98194 919 aaPredicted RBP19.88■□□□□ 0.77
PCDH1-201ENST00000287008 HDLBPQ00341 1268 aaKnown RBP19.88■□□□□ 0.77
PCDH1-201ENST00000287008 IQCB1Q15051 598 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 PDIK1LQ8N165 341 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 EFCC1Q9HA90 598 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 ANAPC7Q9UJX3 599 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 STAP1Q9ULZ2 295 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 TECPR2O15040 1411 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 SLC25A27O95847 323 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 ASPHQ12797 758 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 SEPT6Q14141 434 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 LRRC8CQ8TDW0 803 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 MADDQ8WXG6 1647 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 DLC1Q96QB1 1528 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 CEP72Q9P209 647 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 AGO2Q9UKV8 859 aaKnown RBP19.88■□□□□ 0.77
PCDH1-201ENST00000287008 DIP2CQ9Y2E4 1556 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 ZRANB2O95218 330 aaKnown RBP eCLIP19.88■□□□□ 0.77
PCDH1-201ENST00000287008 ATP1A2P50993 1020 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 PDIA5Q14554 519 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 STOX1Q6ZVD7 989 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 C16orf86Q6ZW13 317 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 NUDCD1Q96RS6 583 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 TMEM39BQ9GZU3 492 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 ALDH8A1Q9H2A2 487 aaPredicted RBP19.88■□□□□ 0.77
PCDH1-201ENST00000287008 ZWILCHQ9H900 591 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 BCL2L12Q9HB09 334 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 RBAKQ9NYW8 714 aaPredicted RBP19.88■□□□□ 0.77
PCDH1-201ENST00000287008 DGAT1O75907 488 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 DUOXA2Q1HG44 320 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 ABCA6Q8N139 1617 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 AGLP35573 1532 aa19.88■□□□□ 0.77
PCDH1-201ENST00000287008 MFAP3LO75121 409 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 CALB1P05937 261 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 CDC42EP1Q00587 391 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 BBS9Q3SYG4 887 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 CETPP11597 493 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 RASA1P20936 1047 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 KPNA2P52292 529 aaKnown RBP19.87■□□□□ 0.77
PCDH1-201ENST00000287008 SEMA3FQ13275 785 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 SAAL1Q96ER3 474 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 ZNF560Q96MR9 790 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 PIDD1Q9HB75 910 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 TUFT1Q9NNX1 390 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 PRDM5Q9NQX1 630 aaPredicted RBP19.87■□□□□ 0.77
PCDH1-201ENST00000287008 GPR75-ASB3A0A0A6YYF3 556 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 STK25O00506 426 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 MSH2P43246 934 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 PCGF5Q86SE9 256 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 SMARCAD1Q9H4L7 1026 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 RGL1Q9NZL6 768 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 UBE4BO95155 1302 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 CEP152O94986 1710 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 CTNND1O60716 968 aaKnown RBP19.87■□□□□ 0.77
PCDH1-201ENST00000287008 SDC4P31431 198 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 KYAT1Q16773 422 aa19.87■□□□□ 0.77
PCDH1-201ENST00000287008 CLTCQ00610 1675 aaKnown RBP19.87■□□□□ 0.77
PCDH1-201ENST00000287008 GNGT1P63211 74 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms