RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 PCDHB15Q9Y5E8 787 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 PODXLO00592 558 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 ITGAXP20702 1163 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 USP14P54578 494 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 IYDQ6PHW0 289 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 LRRC8AQ8IWT6 810 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 METTL22Q9BUU2 404 aaPredicted RBP14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 SEC24DO94855 1032 aaPredicted RBP14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 GRK2P25098 689 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 CXCR5P32302 372 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 C2orf54Q08AI8 447 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 TBC1D1Q86TI0 1168 aaPredicted RBP14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 APLFQ8IW19 511 aaPredicted RBP14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 SCFD1Q8WVM8 642 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 TSC22D4Q9Y3Q8 395 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 NR1H3Q13133 447 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 SLFN13Q68D06 897 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 SH3BP5LQ7L8J4 393 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 VMP1Q96GC9 406 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 MYLK2Q9H1R3 596 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 PRDM5Q9NQX1 630 aaPredicted RBP14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 EHD2Q9NZN4 543 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 RASA4BC9J798 803 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 ENC1O14682 589 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 RASA4O43374 803 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 KRT16P08779 473 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 HSPA2P54652 639 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 CLEC4FQ8N1N0 589 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 AMNQ9BXJ7 453 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 SAYSD1Q9NPB0 183 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 FGD5Q6ZNL6 1462 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 ATAD2BQ9ULI0 1458 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 FYNP06241 537 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 ELAC2Q9BQ52 826 aaKnown RBP14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 PCIF1Q9H4Z3 704 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 SYTL3Q4VX76 610 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 CC2D1AQ6P1N0 951 aaPredicted RBP14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 CCDC149Q6ZUS6 474 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 TTC13Q8NBP0 860 aa14.05□□□□□ -0.16
SMARCA5-201ENST00000283131 USP17L12C9JPN9 530 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 USP17L21D6R901 530 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 SERPINB1P30740 379 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 CLK1P49759 484 aaKnown RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 SLC35F6Q8N357 371 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 OR6P1Q8NGX9 317 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 DDX50Q9BQ39 737 aaKnown RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 HEY1Q9Y5J3 304 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 ZMYND10O75800 440 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 BAG6P46379 1132 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 SLC16A1P53985 500 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 PTGDRQ13258 359 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 MAPRE1Q15691 268 aaKnown RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 NAALADL2Q58DX5 795 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 ZNF594Q96JF6 807 aaPredicted RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 YIPF3Q9GZM5 350 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 SNX14Q9Y5W7 946 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 NBPF9Q3BBW0 867 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 RASSF3Q86WH2 238 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 LRRC59Q96AG4 307 aaKnown RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 TBC1D23Q9NUY8 699 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 RHOBTB1O94844 696 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 SH3TC2Q8TF17 1288 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 THOC1Q96FV9 657 aaKnown RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 PPP1R13BQ96KQ4 1090 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 SPATA16Q9BXB7 569 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 DENND3A2RUS2 1198 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 ANGPT2O15123 496 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 KLHL18O94889 574 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 TMED10P49755 219 aaKnown RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 FASTKD1Q53R41 847 aaKnown RBP14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 DBNDD2Q9BQY9 259 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 GID8Q9NWU2 228 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 E7EWF7 191 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 PPP3CCP48454 512 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 TOGARAM2Q6ZUX3 1019 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 FAM227BQ96M60 508 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 FANCLQ9NW38 375 aa14.04□□□□□ -0.16
SMARCA5-201ENST00000283131 NFX1Q12986 1120 aaKnown RBP14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 KLHL38Q2WGJ6 581 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 ARMC6Q6NXE6 501 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 ZNF713Q8N859 430 aaPredicted RBP14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 ZNF507Q8TCN5 953 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 PPP2R3CQ969Q6 453 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 LCMT1Q9UIC8 334 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 CTIFO43310 598 aaKnown RBP14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 NDUFB5O43674 189 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 GSPT1P15170 499 aaKnown RBP14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 KIF23Q02241 960 aaPredicted RBP14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 PDXDC2PQ6P474 469 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 DDX53Q86TM3 631 aaKnown RBP14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 MB21D1Q8N884 522 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 DHTKD1Q96HY7 919 aaPredicted RBP14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 IKBKBO14920 756 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 MTERF2Q49AM1 385 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 SEPT3Q9UH03 358 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 CCDC195A0A1B0GUA6 201 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 K7ERI5 159 aa14.03□□□□□ -0.16
SMARCA5-201ENST00000283131 ATP8B1O43520 1251 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms