RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 WDR81Q562E7 1941 aa12.06□□□□□ -0.48
GGPS1-201ENST00000282841 OFD1O75665 1012 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 PLS3P13797 630 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 PPP1R2P41236 205 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 NPTX2P47972 431 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 STAT5BP51692 787 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 IGBP1P78318 339 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 KCNMA1Q12791 1236 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 RASAL3Q86YV0 1011 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 LRRC71Q8N4P6 559 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 SAAL1Q96ER3 474 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 AGPAT3Q9NRZ7 376 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 LARSQ9P2J5 1176 aaKnown RBP12.05□□□□□ -0.48
GGPS1-201ENST00000282841 CGNQ9P2M7 1197 aaKnown RBP12.05□□□□□ -0.48
GGPS1-201ENST00000282841 ODF2LQ9ULJ1 636 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 LAMA2P24043 3122 aaKnown RBP12.05□□□□□ -0.48
GGPS1-201ENST00000282841 ANKRD63C9JTQ0 380 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 TNNT1P13805 278 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 POLGP54098 1239 aaPredicted RBP12.05□□□□□ -0.48
GGPS1-201ENST00000282841 KCNH2Q12809 1159 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 TAF1CQ15572 869 aaPredicted RBP12.05□□□□□ -0.48
GGPS1-201ENST00000282841 GJB7Q6PEY0 223 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 LZTFL1Q9NQ48 299 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 TYW1Q9NV66 732 aaKnown RBP12.05□□□□□ -0.48
GGPS1-201ENST00000282841 LUC7L2Q9Y383 392 aaKnown RBP12.05□□□□□ -0.48
GGPS1-201ENST00000282841 NFASCO94856 1347 aa12.05□□□□□ -0.48
GGPS1-201ENST00000282841 DENND3A2RUS2 1198 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 PDXKO00764 312 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 PNMA6AP0CW24 399 aaPredicted RBP12.04□□□□□ -0.48
GGPS1-201ENST00000282841 SLC9A1P19634 815 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 ICAM3P32942 547 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 DLG4P78352 724 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 OTUD6AQ7L8S5 288 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 ANKRD23Q86SG2 305 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 NPLOC4Q8TAT6 608 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 GBP3Q9H0R5 595 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 POLR3FQ9H1D9 316 aaPredicted RBP12.04□□□□□ -0.48
GGPS1-201ENST00000282841 ARMCX3Q9UH62 379 aaPredicted RBP12.04□□□□□ -0.48
GGPS1-201ENST00000282841 TRAF3IP3Q9Y228 551 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 CALUO43852 315 aaPredicted RBP12.04□□□□□ -0.48
GGPS1-201ENST00000282841 CSDE1O75534 798 aaKnown RBP12.04□□□□□ -0.48
GGPS1-201ENST00000282841 LYPLA2O95372 231 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 OATP04181 439 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 ZNF286BP0CG31 522 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 PSEN1P49768 467 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 CCL14Q16627 93 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 TRIM59Q8IWR1 403 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 SENP7Q9BQF6 1050 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 SIK3Q9Y2K2 1263 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.04□□□□□ -0.48
GGPS1-201ENST00000282841 ADCY6O43306 1168 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 EXOC3O60645 756 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 STAM2O75886 525 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 FKBP1BP68106 108 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 CCNA1P78396 465 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 WDR59Q6PJI9 974 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 METTL7BQ6UX53 244 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 RRAGAQ7L523 313 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 ASAP3Q8TDY4 903 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 GPR20Q99678 358 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 LSM14BQ9BX40 385 aaKnown RBP12.04□□□□□ -0.48
GGPS1-201ENST00000282841 KMT5AQ9NQR1 393 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 ANKEF1Q9NU02 776 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 PPP2R2CQ9Y2T4 447 aa12.04□□□□□ -0.48
GGPS1-201ENST00000282841 MAFBQ9Y5Q3 323 aaPredicted RBP12.04□□□□□ -0.48
GGPS1-201ENST00000282841 FGFR1OPO95684 399 aaKnown RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 SNAI1O95863 264 aaPredicted RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 TPM1P09493 284 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 ZBTB48P10074 688 aaPredicted RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 MUTP22033 750 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 NEDD9Q14511 834 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 EMC2Q15006 297 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 ZNF792Q3KQV3 632 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 SEZ6Q53EL9 994 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 XKR3Q5GH77 459 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 CELF3Q5SZQ8 465 aaKnown RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 CCDC62Q6P9F0 684 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 SEPT1Q8WYJ6 367 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 PARK7Q99497 189 aaKnown RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 POP1Q99575 1024 aaKnown RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 RNPEPQ9H4A4 650 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 LRRIQ4A6NIV6 560 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 TTLL13PA6NNM8 815 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 PPP1R37O75864 691 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 CYP2B6P20813 491 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 POLR2FP61218 127 aaKnown RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 DMP1Q13316 513 aaPredicted RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 BMT2Q1RMZ1 405 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 EDRF1Q3B7T1 1238 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 CYP4F22Q6NT55 531 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 RGMBQ6NW40 437 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 HS2ST1Q7LGA3 356 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 DNAAF5Q86Y56 855 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 CNGA4Q8IV77 575 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 FAM186BQ8IYM0 893 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 TMEM161BQ8NDZ6 487 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 DRC1Q96MC2 740 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 PLCD4Q9BRC7 762 aa12.03□□□□□ -0.48
GGPS1-201ENST00000282841 GTPBP4Q9BZE4 634 aaKnown RBP12.03□□□□□ -0.48
GGPS1-201ENST00000282841 GPBP1L1Q9HC44 474 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms