RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 PCDHA13Q9Y5I0 950 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 V9GYY5 206 aaPredicted RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 PTPRFP10586 1907 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 GTPBP10A4D1E9 387 aaKnown RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 GLTPD2A6NH11 291 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 AKR1B10O60218 316 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 ATG7O95352 703 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 SERPING1P05155 500 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 CYP2J2P51589 502 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 ALDH5A1P51649 535 aaPredicted RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 VAV2P52735 878 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 PEX3P56589 373 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 SLC9C1Q4G0N8 1177 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 FAM102BQ5T8I3 360 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 MIS18BP1Q6P0N0 1132 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 MTERF4Q7Z6M4 381 aaKnown RBP10.5□□□□□ -0.73
TRIM55-201ENST00000276573 NCAPG2Q86XI2 1143 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 SLC17A8Q8NDX2 589 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 MNS1Q8NEH6 495 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 CEP170P1Q96L14 293 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 MAP7D2Q96T17 732 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 PAGR1Q9BTK6 254 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 DEF6Q9H4E7 631 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 GPRC5CQ9NQ84 441 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 PDLIM7Q9NR12 457 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 CDC23Q9UJX2 597 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 AGTPBP1Q9UPW5 1226 aa10.5□□□□□ -0.73
TRIM55-201ENST00000276573 OTOFQ9HC10 1997 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 SLC16A4O15374 487 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 EXOC3O60645 756 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 SLC25A27O95847 323 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 SUPT20HL2P0C7V6 817 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 NCKAP1LP55160 1127 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 SNRPFP62306 86 aaKnown RBP10.49□□□□□ -0.73
TRIM55-201ENST00000276573 KIF5AQ12840 1032 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 MOGSQ13724 837 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 PPP2R5AQ15172 486 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 ERCC6LQ2NKX8 1250 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 SEPT14Q6ZU15 432 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 FASTKD5Q7L8L6 764 aaKnown RBP10.49□□□□□ -0.73
TRIM55-201ENST00000276573 ARMC9Q7Z3E5 817 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 CCDC60Q8IWA6 550 aaPredicted RBP10.49□□□□□ -0.73
TRIM55-201ENST00000276573 C12orf56Q8IXR9 622 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 OPTNQ96CV9 577 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 NAPGQ99747 312 aaPredicted RBP10.49□□□□□ -0.73
TRIM55-201ENST00000276573 NTPCRQ9BSD7 190 aaKnown RBP10.49□□□□□ -0.73
TRIM55-201ENST00000276573 TAF1DQ9H5J8 278 aaPredicted RBP10.49□□□□□ -0.73
TRIM55-201ENST00000276573 SIX2Q9NPC8 291 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 RBPJLQ9UBG7 517 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 FBXL5Q9UKA1 691 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 MYH11P35749 1972 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 KIAA1217Q5T5P2 1943 aa10.49□□□□□ -0.73
TRIM55-201ENST00000276573 LOC285556D6RIA3 1793 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 SORBS3O60504 671 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 UCHL3P15374 230 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 EDNRBP24530 442 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 MAGEA1P43355 309 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 FMO5P49326 533 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 SMTNP53814 917 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 SP4Q02446 784 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 LDLRAD1Q5T700 205 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 GPAT2Q6NUI2 795 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 CYFIP1Q7L576 1253 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 GPIHBP1Q8IV16 184 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 FAM133AQ8N9E0 248 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 KIFAP3Q92845 792 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 TSGA10Q9BZW7 698 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 R3HDMLQ9H3Y0 253 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 C17orf75Q9HAS0 396 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 MYO6Q9UM54 1294 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 DUSP10Q9Y6W6 482 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 LCTP09848 1927 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 A0A0G2JMZ2 1700 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 CCDC169A6NNP5 214 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 EFCAB8A8MWE9 144 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 RBAK-RBAKDNI3L0D1 243 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 TADA3O75528 432 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 DGAT1O75907 488 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 OSBPP22059 807 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 NPTX2P47972 431 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 PRKCEQ02156 737 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 RAPGEF1Q13905 1077 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 ELF2Q15723 593 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 ASIC2Q16515 512 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 Q3C1V9 767 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 EAPPQ56P03 285 aaPredicted RBP10.48□□□□□ -0.73
TRIM55-201ENST00000276573 TDRD12Q587J7 1177 aaKnown RBP10.48□□□□□ -0.73
TRIM55-201ENST00000276573 XKR3Q5GH77 459 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRIM55-201ENST00000276573 IRF2BP2Q7Z5L9 587 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 RDH13Q8NBN7 331 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 EHBP1Q8NDI1 1231 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 TMEM161BQ8NDZ6 487 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 SPIRE2Q8WWL2 714 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 UBXN4Q92575 508 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 IFIH1Q9BYX4 1025 aaKnown RBP10.48□□□□□ -0.73
TRIM55-201ENST00000276573 PCIF1Q9H4Z3 704 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 CYP26B1Q9NR63 512 aa10.48□□□□□ -0.73
TRIM55-201ENST00000276573 FHOD1Q9Y613 1164 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms