RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 FAM86B2P0C5J1 330 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 CHN1P15882 459 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 RPA1P27694 616 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 SNCBQ16143 134 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 C15orf52Q6ZUT6 534 aaKnown RBP29.81■■■□□ 2.36
CBX4-201ENST00000269397 PIGOQ8TEQ8 1089 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 CHMP6Q96FZ7 201 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 A1CFQ9NQ94 594 aaKnown RBP29.81■■■□□ 2.36
CBX4-201ENST00000269397 DAAM1Q9Y4D1 1078 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 TGFB1I1O43294 461 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 NMT1P30419 496 aaKnown RBP29.81■■■□□ 2.36
CBX4-201ENST00000269397 SOX5P35711 763 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 PTENP60484 403 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 USH1GQ495M9 461 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 CTNNBL1Q8WYA6 563 aaPredicted RBP29.81■■■□□ 2.36
CBX4-201ENST00000269397 RFFLQ8WZ73 363 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 ALG3Q92685 438 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 TXLNGYQ9BZA5 131 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 THAP2Q9H0W7 228 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 DNAJC12Q9UKB3 198 aa29.81■■■□□ 2.36
CBX4-201ENST00000269397 RIMBP2O15034 1052 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 TBCAO75347 108 aaKnown RBP29.8■■■□□ 2.36
CBX4-201ENST00000269397 CCDC172P0C7W6 258 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 KRT13P13646 458 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 ERMARDQ5T6L9 678 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 ERMNQ8TAM6 284 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 FBXO25Q8TCJ0 367 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 CCT6BQ92526 530 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 ERP44Q9BS26 406 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 RAB17Q9H0T7 212 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 ZDHHC18Q9NUE0 388 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 CCNL1Q9UK58 526 aaPredicted RBP29.8■■■□□ 2.36
CBX4-201ENST00000269397 KDM4FA0A1W2PPD8 638 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 SCNN1DP51172 638 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 NPEPPSP55786 919 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 PLS1Q14651 629 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 ARHGAP44Q17R89 818 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 RC3H1Q5TC82 1133 aaKnown RBP29.8■■■□□ 2.36
CBX4-201ENST00000269397 NAP1L4Q99733 375 aaKnown RBP29.8■■■□□ 2.36
CBX4-201ENST00000269397 INTUQ9ULD6 942 aa29.8■■■□□ 2.36
CBX4-201ENST00000269397 TPX2Q9ULW0 747 aaKnown RBP29.8■■■□□ 2.36
CBX4-201ENST00000269397 RGL2O15211 777 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 IFI35P80217 286 aaPredicted RBP29.79■■■□□ 2.36
CBX4-201ENST00000269397 E2F5Q15329 346 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 DUPD1Q68J44 220 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 FAM186BQ8IYM0 893 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 RNF25Q96BH1 459 aaPredicted RBP29.79■■■□□ 2.36
CBX4-201ENST00000269397 SGSM3Q96HU1 749 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 CHORDC1Q9UHD1 332 aaPredicted RBP29.79■■■□□ 2.36
CBX4-201ENST00000269397 MYO3BQ8WXR4 1341 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 CYP3A7-CYP3A51PA0A087WV96 503 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 TRIM49P0CI25 452 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 TRIM49CP0CI26 452 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 CYP3A7P24462 503 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 C18orf8Q96DM3 657 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 MTFR1LQ9H019 292 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 COG5Q9UP83 839 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 KIF13BQ9NQT8 1826 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 MMEP08473 750 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 ATP2B4P23634 1241 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 PMS2P54278 862 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 PPATQ06203 517 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 AZI2Q9H6S1 392 aa29.79■■■□□ 2.36
CBX4-201ENST00000269397 ZBTB39O15060 712 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 CBWD6Q4V339 395 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 CBWD3Q5JTY5 395 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 CBWD5Q5RIA9 395 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 LENG9Q96B70 501 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 FAM129AQ9BZQ8 928 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 USP40Q9NVE5 1235 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 GOLGB1Q14789 3259 aaKnown RBP29.78■■■□□ 2.36
CBX4-201ENST00000269397 LRRN2O75325 713 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 SLCO1A2P46721 670 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 SLC29A2Q14542 456 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 JAMLQ86YT9 394 aa29.78■■■□□ 2.36
CBX4-201ENST00000269397 EPB41L3Q9Y2J2 1087 aaPredicted RBP29.78■■■□□ 2.36
CBX4-201ENST00000269397 SLC16A3O15427 465 aaKnown RBP29.77■■■□□ 2.36
CBX4-201ENST00000269397 TMEM253P0C7T8 217 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 ANXA13P27216 316 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 KLRC3Q07444 240 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 BORCS6Q96GS4 357 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 TMEM110-MUSTN1A8MSY1 372 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 EML1O00423 815 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 LMNB1P20700 586 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 EIF3BP55884 814 aaKnown RBP29.77■■■□□ 2.36
CBX4-201ENST00000269397 PREPLQ4J6C6 727 aaPredicted RBP29.77■■■□□ 2.36
CBX4-201ENST00000269397 BARGINQ6ZT62 677 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 TBC1D16Q8TBP0 767 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 NEK9Q8TD19 979 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 MBOAT7Q96N66 472 aa29.77■■■□□ 2.36
CBX4-201ENST00000269397 CNOT10Q9H9A5 744 aaKnown RBP29.77■■■□□ 2.36
CBX4-201ENST00000269397 TTC7AQ9ULT0 858 aaPredicted RBP29.77■■■□□ 2.36
CBX4-201ENST00000269397 HOXA13P31271 388 aaPredicted RBP29.76■■■□□ 2.35
CBX4-201ENST00000269397 CYP2J2P51589 502 aa29.76■■■□□ 2.35
CBX4-201ENST00000269397 CTTNQ14247 550 aaKnown RBP29.76■■■□□ 2.35
CBX4-201ENST00000269397 DENND2CQ68D51 928 aa29.76■■■□□ 2.35
CBX4-201ENST00000269397 PRR5LQ6MZQ0 368 aa29.76■■■□□ 2.35
CBX4-201ENST00000269397 HOOK3Q86VS8 718 aa29.76■■■□□ 2.35
CBX4-201ENST00000269397 MYCT1Q8N699 235 aa29.76■■■□□ 2.35
CBX4-201ENST00000269397 GIMAP7Q8NHV1 300 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms