RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 CETN3O15182 167 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 STX10O60499 249 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 MFAP3LO75121 409 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 UBA1P22314 1058 aaKnown RBP16.91■□□□□ 0.3
COPS3-201ENST00000268717 FIGNQ5HY92 759 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 ODR4Q5SWX8 454 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 FKBP15Q5T1M5 1219 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 NELFCDQ8IXH7 590 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 NPLOC4Q8TAT6 608 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 GOLGA5Q8TBA6 731 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 TMEM174Q8WUU8 243 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 NUP58Q9BVL2 599 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 C17orf75Q9HAS0 396 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 DOCK5Q9H7D0 1870 aa16.91■□□□□ 0.3
COPS3-201ENST00000268717 SLC16A3O15427 465 aaKnown RBP16.9■□□□□ 0.3
COPS3-201ENST00000268717 ARHGAP6O43182 974 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 PPP1R37O75864 691 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 STBD1O95210 358 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 GYPCP04921 128 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 PLS3P13797 630 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 PRKAR2AP13861 404 aaKnown RBP16.9■□□□□ 0.3
COPS3-201ENST00000268717 FECHP22830 423 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 RPL13P26373 211 aaKnown RBP16.9■□□□□ 0.3
COPS3-201ENST00000268717 HOXD13P35453 343 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 SP2Q02086 613 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 PPP2R3AQ06190 1150 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 VWA3BQ502W6 1294 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 XKR3Q5GH77 459 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 METTL7BQ6UX53 244 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 ANO5Q75V66 913 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 DPP9Q86TI2 863 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 TMEM139Q8IV31 216 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 U2AF1L4Q8WU68 220 aaKnown RBP16.9■□□□□ 0.3
COPS3-201ENST00000268717 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.9■□□□□ 0.3
COPS3-201ENST00000268717 BCAS3Q9H6U6 928 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 FLRT1Q9NZU1 646 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 MAFBQ9Y5Q3 323 aaPredicted RBP16.9■□□□□ 0.3
COPS3-201ENST00000268717 WDR81Q562E7 1941 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 SYNGAP1Q96PV0 1343 aa16.9■□□□□ 0.3
COPS3-201ENST00000268717 BACH1O14867 736 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 ZNF862O60290 1169 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 FARP2O94887 1054 aaPredicted RBP16.89■□□□□ 0.29
COPS3-201ENST00000268717 SGPL1O95470 568 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 RTP1P59025 263 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 ADAM9Q13443 819 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 MYBPC2Q14324 1141 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 XKR9Q5GH70 373 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 SEPT14Q6ZU15 432 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 CYFIP1Q7L576 1253 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 ZNF467Q7Z7K2 595 aaPredicted RBP16.89■□□□□ 0.29
COPS3-201ENST00000268717 CREBRFQ8IUR6 639 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 CCDC60Q8IWA6 550 aaPredicted RBP16.89■□□□□ 0.29
COPS3-201ENST00000268717 NDST4Q9H3R1 872 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 HMX1Q9NP08 348 aaPredicted RBP16.89■□□□□ 0.29
COPS3-201ENST00000268717 CGNQ9P2M7 1197 aaKnown RBP16.89■□□□□ 0.29
COPS3-201ENST00000268717 FAM184BQ9ULE4 1060 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 PPME1Q9Y570 386 aa16.89■□□□□ 0.29
COPS3-201ENST00000268717 CCP110O43303 1012 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 USO1O60763 962 aaKnown RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 DGAT1O75907 488 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 PRPF6O94906 941 aaKnown RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 IGHA2P01877 340 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 PGK2P07205 417 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 NR2F2P24468 414 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 SNRPFP62306 86 aaKnown RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 PRKCEQ02156 737 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 CACNB2Q08289 660 aaPredicted RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 RBL2Q08999 1139 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 TBC1D8BQ0IIM8 1120 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 SWSAP1Q6NVH7 229 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 FRMD5Q7Z6J6 570 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 TRIM59Q8IWR1 403 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 MCPH1Q8NEM0 835 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 AFAP1L1Q8TED9 768 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 KIFAP3Q92845 792 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 HVCN1Q96D96 273 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 DEFB118Q96PH6 123 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 BAG1Q99933 345 aaPredicted RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 KCNG1Q9UIX4 513 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 ZMYM2Q9UBW7 1377 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 FRMPD3Q5JV73 1810 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 SFI1A8K8P3 1242 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 OFD1O75665 1012 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 SCP2P22307 547 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 NMT1P30419 496 aaKnown RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 ABCD1P33897 745 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 ZNF792Q3KQV3 632 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 CCDC40Q4G0X9 1142 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 MFSD14CQ5VZR4 134 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 OLFML2BQ68BL8 750 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 HS2ST1Q7LGA3 356 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 KCNN1Q92952 543 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 MKNK1Q9BUB5 465 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 TMEM206Q9H813 350 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 METTL14Q9HCE5 456 aaKnown RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 ZNF302Q9NR11 478 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 SLC5A4Q9NY91 659 aa16.88■□□□□ 0.29
COPS3-201ENST00000268717 DDX41Q9UJV9 622 aaKnown RBP16.88■□□□□ 0.29
COPS3-201ENST00000268717 TELO2Q9Y4R8 837 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms