RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 MMRN2Q9H8L6 949 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 METTL14Q9HCE5 456 aaKnown RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 XPNPEP1Q9NQW7 623 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 FAM207AQ9NSI2 230 aaPredicted RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 A0A1W2PQJ5 194 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 DCAF8L1A6NGE4 600 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 CCDC169A6NNP5 214 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 XRCC5P13010 732 aaKnown RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 TNNT1P13805 278 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 NPTX2P47972 431 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 ZNF157P51786 506 aaPredicted RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 SMTNP53814 917 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 ZBED6P86452 979 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 GTF2BQ00403 316 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 KCNH2Q12809 1159 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 PTPN14Q15678 1187 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 FAM110CQ1W6H9 321 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 ZNF792Q3KQV3 632 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 DCAF17Q5H9S7 520 aaPredicted RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 CELF3Q5SZQ8 465 aaKnown RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 FAM160B1Q5W0V3 765 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 TMTC1Q8IUR5 882 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 ABRAQ8N0Z2 381 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 BSNDQ8WZ55 320 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 PDLIM7Q9NR12 457 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 PPP2R2CQ9Y2T4 447 aa12.69□□□□□ -0.38
SCAF11-201ENST00000266589 R3HCC1Q9Y3T6 440 aaKnown RBP12.69□□□□□ -0.38
SCAF11-201ENST00000266589 NOP56O00567 594 aaKnown RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 EPHB6O15197 1021 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 ZSCAN12O43309 604 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 STRNO43815 780 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 CYP2J2P51589 502 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 STAT5BP51692 787 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 POLGP54098 1239 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 PPP2R3AQ06190 1150 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 KCNMA1Q12791 1236 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 EMC2Q15006 297 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 TSR1Q2NL82 804 aaKnown RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 HSDL1Q3SXM5 330 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 CCDC62Q6P9F0 684 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 CYP26C1Q6V0L0 522 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 GPR142Q7Z601 462 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 FAM186BQ8IYM0 893 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 AFAP1L1Q8TED9 768 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 GPR20Q99678 358 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 DESI2Q9BSY9 194 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 MKNK1Q9BUB5 465 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 KIFC3Q9BVG8 833 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 C17orf75Q9HAS0 396 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 KMT5AQ9NQR1 393 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 PDGFCQ9NRA1 345 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 DMAC2Q9NW81 257 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 AFPP02771 609 aaKnown RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 PSMC2P35998 433 aaKnown RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 RTP1P59025 263 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 TTLL4Q14679 1199 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 TCERG1LQ5VWI1 586 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 DHX37Q8IY37 1157 aaKnown RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 TMEM161BQ8NDZ6 487 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 ZNF397Q8NF99 534 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 NEK11Q8NG66 645 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 COPS5Q92905 334 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 NIFKQ9BYG3 293 aaKnown RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 POLR3FQ9H1D9 316 aaPredicted RBP12.68□□□□□ -0.38
SCAF11-201ENST00000266589 AZI2Q9H6S1 392 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 FRMD4BQ9Y2L6 1034 aa12.68□□□□□ -0.38
SCAF11-201ENST00000266589 TISP43B9A030 160 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 GRB14Q14449 540 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 TMEM63BQ5T3F8 832 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 SLC9A9Q8IVB4 645 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 REXO1L1PQ8IX06 675 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 SCFD2Q8WU76 684 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 SLC35C1Q96A29 364 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 BORCS6Q96GS4 357 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 SPATA33Q96N06 139 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 CRACR2AQ9BSW2 395 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 NRBP2Q9NSY0 501 aa12.67□□□□□ -0.38
SCAF11-201ENST00000266589 DENND3A2RUS2 1198 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 MANSC4A6NHS7 340 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 IGF2BP3O00425 579 aaKnown RBP eCLIP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 EXOC3O60645 756 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 CCDC175P0C221 793 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 MYBPC2Q14324 1141 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 MEA1Q16626 185 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 WDR59Q6PJI9 974 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 PLEKHH3Q7Z736 793 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 ZNF467Q7Z7K2 595 aaPredicted RBP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 DPP9Q86TI2 863 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 SAPCD2Q86UD0 394 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 SLC7A3Q8WY07 619 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 GLG1Q92896 1179 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 HVCN1Q96D96 273 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 IFT74Q96LB3 600 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 CEP89Q96ST8 783 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 CHP1Q99653 195 aa12.66□□□□□ -0.38
SCAF11-201ENST00000266589 NTPCRQ9BSD7 190 aaKnown RBP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 LSM14BQ9BX40 385 aaKnown RBP12.66□□□□□ -0.38
SCAF11-201ENST00000266589 DHX33Q9H6R0 707 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms