RNA–Protein interactions for RNA: ENST00000266546.10

CLSTN3-201, Transcript of calsyntenin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,185 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-201ENST00000266546 RBM12Q9NTZ6 932 aaKnown RBP12.46□□□□□ -0.41
CLSTN3-201ENST00000266546 ATP2A2P16615 1042 aaKnown RBP12.46□□□□□ -0.42
CLSTN3-201ENST00000266546 SP4Q02446 784 aa12.46□□□□□ -0.42
CLSTN3-201ENST00000266546 KCNB1Q14721 858 aa12.46□□□□□ -0.42
CLSTN3-201ENST00000266546 NLRX1Q86UT6 975 aa12.46□□□□□ -0.42
CLSTN3-201ENST00000266546 KIFAP3Q92845 792 aa12.46□□□□□ -0.42
CLSTN3-201ENST00000266546 MS4A14Q96JA4 679 aa12.46□□□□□ -0.42
CLSTN3-201ENST00000266546 RGS17Q9UGC6 210 aaPredicted RBP12.46□□□□□ -0.42
CLSTN3-201ENST00000266546 COL24A1Q17RW2 1714 aa12.46□□□□□ -0.42
CLSTN3-201ENST00000266546 AKAP11Q9UKA4 1901 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 BACH1O14867 736 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 TBC1D12O60347 775 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 FERP16591 822 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 CAP2P40123 477 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 CARSP49589 748 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 DR1Q01658 176 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 PPP4R3AQ6IN85 833 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 GBP7Q8N8V2 638 aaPredicted RBP12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 RDH13Q8NBN7 331 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 SAAL1Q96ER3 474 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 CHMP6Q96FZ7 201 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 CCSER1Q9C0I3 900 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 CEP72Q9P209 647 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 CCDC88AQ3V6T2 1871 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 ARAP2Q8WZ64 1704 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 DDX39AO00148 427 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 FGGP02679 453 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 CYP4A11Q02928 519 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 NUGGCQ68CJ6 796 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 NSMFQ6X4W1 530 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 MAEAQ7L5Y9 396 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 RNPC3Q96LT9 517 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 GBP5Q96PP8 586 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 WDR11Q9BZH6 1224 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 KIAA1024Q9UPX6 916 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 PTPN22Q9Y2R2 807 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 GAS7O60861 476 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 FAM107AO95990 144 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 PDE6CP51160 858 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 PSMD2Q13200 908 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 C6orf118Q5T5N4 469 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 PAPD7Q5XG87 772 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 ANKRD40Q6AI12 368 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 TTBK2Q6IQ55 1244 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 C7orf43Q8WVR3 580 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 FAM20AQ96MK3 541 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 HAUS2Q9NVX0 235 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 DMGDHQ9UI17 866 aaKnown RBP12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 FBXL5Q9UKA1 691 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 TMX2Q9Y320 296 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 C10orf71Q711Q0 1435 aa12.45□□□□□ -0.42
CLSTN3-201ENST00000266546 C19orf81C9J6K1 198 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 AFPP02771 609 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 TROVE2P10155 538 aaKnown RBP eCLIP12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 KRT5P13647 590 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 ADCY8P40145 1251 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 UNC13DQ70J99 1090 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 MAIP1Q8WWC4 291 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 GJA10Q969M2 543 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 ARL8AQ96BM9 186 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 WRNIP1Q96S55 665 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 TMEM39BQ9GZU3 492 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 ADCY2Q08462 1091 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 PDIA5Q14554 519 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 CDKAL1Q5VV42 579 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 TPH2Q8IWU9 490 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 MYCP01106 439 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 CYP2J2P51589 502 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 ADCY1Q08828 1119 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 TATDN1Q6P1N9 297 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 KSR1Q8IVT5 923 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 CEP63Q96MT8 703 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 DEFB129Q9H1M3 183 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 CD248Q9HCU0 757 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 IL9RQ01113 521 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 FUT2Q10981 343 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 PTGISQ16647 500 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 SUGP1Q8IWZ8 645 aaKnown RBP12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 FAM212AQ96EL1 285 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 TEKT3Q9BXF9 490 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 LACRTQ9GZZ8 138 aa12.44□□□□□ -0.42
CLSTN3-201ENST00000266546 WNT10BO00744 389 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 MESDQ14696 234 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 GNPTABQ3T906 1256 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 CLEC10AQ8IUN9 316 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 SAMD3Q8N6K7 520 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 RBM46Q8TBY0 533 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 SPDL1Q96EA4 605 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 CYFIP2Q96F07 1278 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 THOC1Q96FV9 657 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 VPS37BQ9H9H4 285 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 SLC40A1Q9NP59 571 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 TYW1Q9NV66 732 aaKnown RBP12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 DUSP10Q9Y6W6 482 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 IQCA1LA6NCM1 817 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 SMIM22K7EJ46 135 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 GRIN3BO60391 1043 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 GFPT2O94808 682 aa12.43□□□□□ -0.42
CLSTN3-201ENST00000266546 FCER1AP12319 257 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms