RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 FAM118BQ9BPY3 351 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 OSBPL7Q9BZF2 842 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 GMNCA6NCL1 334 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 FOXN3O00409 490 aaPredicted RBP18.24■□□□□ 0.51
SQLE-201ENST00000265896 CALUO43852 315 aaPredicted RBP18.24■□□□□ 0.51
SQLE-201ENST00000265896 RINT1Q6NUQ1 792 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 SYT2Q8N9I0 419 aaPredicted RBP18.24■□□□□ 0.51
SQLE-201ENST00000265896 FBXO25Q8TCJ0 367 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 PLCB1Q9NQ66 1216 aa18.24■□□□□ 0.51
SQLE-201ENST00000265896 UTP11Q9Y3A2 253 aaKnown RBP18.24■□□□□ 0.51
SQLE-201ENST00000265896 FAM107AO95990 144 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 SMARCA1P28370 1054 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 MESDQ14696 234 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 DAB2IPQ5VWQ8 1189 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 MCTP2Q6DN12 878 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 VPS36Q86VN1 386 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 TAX1BP1Q86VP1 789 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 GOLGA8IPA6NC78 632 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 GOLGA8JA6NMD2 632 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 GH2P01242 217 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 EDRF1Q3B7T1 1238 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 CCDC121Q6ZUS5 278 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 FRMD5Q7Z6J6 570 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 SYCP3Q8IZU3 236 aa18.23■□□□□ 0.51
SQLE-201ENST00000265896 CTNNBL1Q8WYA6 563 aaPredicted RBP18.23■□□□□ 0.51
SQLE-201ENST00000265896 F8VZ95 297 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 CTNND1O60716 968 aaKnown RBP18.22■□□□□ 0.51
SQLE-201ENST00000265896 NDUFB10O96000 172 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 GCFC2P16383 781 aaKnown RBP18.22■□□□□ 0.51
SQLE-201ENST00000265896 RPA1P27694 616 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 TRIP13Q15645 432 aaPredicted RBP18.22■□□□□ 0.51
SQLE-201ENST00000265896 RC3H1Q5TC82 1133 aaKnown RBP18.22■□□□□ 0.51
SQLE-201ENST00000265896 MSL1Q68DK7 614 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 FBXO11Q86XK2 927 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 FMO2Q99518 471 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 CTTNBP2NLQ9P2B4 639 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 DBR1Q9UK59 544 aaKnown RBP18.22■□□□□ 0.51
SQLE-201ENST00000265896 CD2APQ9Y5K6 639 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 CPP00450 1065 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 GCLMP48507 274 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 VPS41P49754 854 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 PPP2R2AP63151 447 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 DR1Q01658 176 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 ODR4Q5SWX8 454 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 ERMNQ8TAM6 284 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 ACTRT1Q8TDG2 376 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 LRRC45Q96CN5 670 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 PBKQ96KB5 322 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 SLC12A6Q9UHW9 1150 aa18.22■□□□□ 0.51
SQLE-201ENST00000265896 FRMD3A2A2Y4 597 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 PPEF1O14829 653 aaPredicted RBP18.21■□□□□ 0.51
SQLE-201ENST00000265896 EXOC3O60645 756 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 TNFAIP3P21580 790 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 SSTR3P32745 418 aaPredicted RBP18.21■□□□□ 0.51
SQLE-201ENST00000265896 IRX3P78415 501 aaPredicted RBP18.21■□□□□ 0.51
SQLE-201ENST00000265896 SNX1Q13596 522 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 EPC2Q52LR7 807 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 PHLDB3Q6NSJ2 640 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 SH3BP5LQ7L8J4 393 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 EPS8L3Q8TE67 593 aaKnown RBP18.21■□□□□ 0.51
SQLE-201ENST00000265896 TBC1D22AQ8WUA7 517 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 SEC16BQ96JE7 1060 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 WDR18Q9BV38 432 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 SEMA4AQ9H3S1 761 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 AZI2Q9H6S1 392 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 UBE2TQ9NPD8 197 aaPredicted RBP18.21■□□□□ 0.51
SQLE-201ENST00000265896 TYW1Q9NV66 732 aaKnown RBP18.21■□□□□ 0.51
SQLE-201ENST00000265896 TRAF3IP3Q9Y228 551 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 NOVP48745 357 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 RRP1BQ14684 758 aaKnown RBP18.21■□□□□ 0.51
SQLE-201ENST00000265896 MREGQ8N565 214 aa18.21■□□□□ 0.51
SQLE-201ENST00000265896 TDRD3Q9H7E2 651 aaKnown RBP18.21■□□□□ 0.51
SQLE-201ENST00000265896 A0A1W2PRG0 241 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 ANKRD63C9JTQ0 380 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 hCG_1984214I3L0E3 225 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 CRKP46108 304 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 MARSP56192 900 aaKnown RBP18.21■□□□□ 0.5
SQLE-201ENST00000265896 SLC29A2Q14542 456 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 HYIQ5T013 277 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 ZDHHC14Q8IZN3 488 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 ZNF713Q8N859 430 aaPredicted RBP18.21■□□□□ 0.5
SQLE-201ENST00000265896 ATP8B4Q8TF62 1192 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 TEKT1Q969V4 418 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 FAM163AQ96GL9 167 aaPredicted RBP18.21■□□□□ 0.5
SQLE-201ENST00000265896 PWWP2AQ96N64 755 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 AMNQ9BXJ7 453 aa18.21■□□□□ 0.5
SQLE-201ENST00000265896 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.21■□□□□ 0.5
SQLE-201ENST00000265896 ZBTB48P10074 688 aaPredicted RBP18.2■□□□□ 0.5
SQLE-201ENST00000265896 SOX5P35711 763 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 FMO5P49326 533 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 ORC2Q13416 577 aaPredicted RBP18.2■□□□□ 0.5
SQLE-201ENST00000265896 FAM178BQ8IXR5 827 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 SLFN12Q8IYM2 578 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 TBC1D31Q96DN5 1066 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 ADAM33Q9BZ11 813 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 SLC40A1Q9NP59 571 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 PDXKO00764 312 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 CUL1Q13616 776 aa18.2■□□□□ 0.5
SQLE-201ENST00000265896 FAM133BQ5BKY9 247 aaKnown RBP18.2■□□□□ 0.5
SQLE-201ENST00000265896 PRPF38AQ8NAV1 312 aaKnown RBP18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms