RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 GUCD1Q96NT3 240 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 NACC1Q96RE7 527 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 DBR1Q9UK59 544 aaKnown RBP9.4□□□□□ -0.9
ERCC8-201ENST00000265038 CLIC4Q9Y696 253 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 TANC1Q9C0D5 1861 aa9.4□□□□□ -0.9
ERCC8-201ENST00000265038 A0A087WZ62 844 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 LCHNA4D1U4 455 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 GPR182O15218 404 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 CSDE1O75534 798 aaKnown RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 CA3P07451 260 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 MUTP22033 750 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 EIF4BP23588 611 aaKnown RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 HTRA4P83105 476 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 CDC42EP1Q00587 391 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 GRIN2CQ14957 1233 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 PTPAQ15257 358 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 HAUS3Q68CZ6 603 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 CRIPAKQ8N1N5 446 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 SNX29Q8TEQ0 813 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 PRPF31Q8WWY3 499 aaKnown RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 NLRP7Q8WX94 980 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 RAD9AQ99638 391 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 FDXACB1Q9BRP7 624 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 ZBED2Q9BTP6 218 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 FTHL17Q9BXU8 183 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 RAB34Q9BZG1 259 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 TSPYL2Q9H2G4 693 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 SLC28A3Q9HAS3 691 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 TET1Q8NFU7 2136 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 VWA3AA6NCI4 1184 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 GAS2O43903 313 aaKnown RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 DGAT1O75907 488 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 UPP2O95045 317 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 HSP90AA1P07900 732 aaKnown RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 FGFR4P22455 802 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 GRIN1Q05586 938 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 DSC3Q14574 896 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 ODR4Q5SWX8 454 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 ZNF410Q86VK4 478 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 SCLT1Q96NL6 688 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 CDX2Q99626 313 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 MTRQ99707 1265 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 GCOM2Q9BZD3 368 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 ZSCAN16Q9H4T2 348 aaPredicted RBP9.39□□□□□ -0.91
ERCC8-201ENST00000265038 IFT122Q9HBG6 1241 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 KIAA1024Q9UPX6 916 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 COL4A3BPQ9Y5P4 624 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 STK24Q9Y6E0 443 aa9.39□□□□□ -0.91
ERCC8-201ENST00000265038 USO1O60763 962 aaKnown RBP9.38□□□□□ -0.91
ERCC8-201ENST00000265038 BMP15O95972 392 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 ARL2P36404 184 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 TAP1Q03518 808 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 LAMTOR4Q0VGL1 99 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 KRT79Q5XKE5 535 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 FAM43BQ6ZT52 329 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-201ENST00000265038 SPRED2Q7Z698 418 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 ASAP3Q8TDY4 903 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 TCP11Q8WWU5 503 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 PSPC1Q8WXF1 523 aaKnown RBP9.38□□□□□ -0.91
ERCC8-201ENST00000265038 NLRP4Q96MN2 994 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 PNMA5Q96PV4 448 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 ADAM2Q99965 735 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 ATP6V0A4Q9HBG4 840 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 RGS18Q9NS28 235 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 DDX19AQ9NUU7 478 aaKnown RBP9.38□□□□□ -0.91
ERCC8-201ENST00000265038 INSL6Q9Y581 213 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 C9IYK1 514 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 E9PMD0 336 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 SRGAP2CP0DJJ0 459 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 PKP1Q13835 747 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 HYIQ5T013 277 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 PADI6Q6TGC4 694 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 MAEAQ7L5Y9 396 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 KCNK18Q7Z418 384 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 SP7Q8TDD2 431 aaPredicted RBP9.38□□□□□ -0.91
ERCC8-201ENST00000265038 CCDC43Q96MW1 224 aaKnown RBP9.38□□□□□ -0.91
ERCC8-201ENST00000265038 USP28Q96RU2 1077 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 GPRC5CQ9NQ84 441 aa9.38□□□□□ -0.91
ERCC8-201ENST00000265038 LINC01553A4QN01 128 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 ARHGEF35A5YM69 484 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 ASAP2O43150 1006 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 CYP11B2P19099 503 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 GLRA2P23416 452 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 MARCKSP29966 332 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-201ENST00000265038 FAM189BP81408 668 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 CEBPZQ03701 1054 aaKnown RBP9.37□□□□□ -0.91
ERCC8-201ENST00000265038 GRB10Q13322 594 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 FOXD4L5Q5VV16 416 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-201ENST00000265038 SLC24A5Q71RS6 500 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 RNF149Q8NC42 400 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 FOXD4L4Q8WXT5 416 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-201ENST00000265038 MYLIPQ8WY64 445 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 ZNF689Q96CS4 500 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-201ENST00000265038 YME1L1Q96TA2 773 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 POLR3FQ9H1D9 316 aaPredicted RBP9.37□□□□□ -0.91
ERCC8-201ENST00000265038 BHMT2Q9H2M3 363 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 PRDM12Q9H4Q4 367 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 MINDY3Q9H8M7 445 aa9.37□□□□□ -0.91
ERCC8-201ENST00000265038 CERS4Q9HA82 394 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms