RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 PDXDC2PQ6P474 469 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 WDR75Q8IWA0 830 aaKnown RBP19.24■□□□□ 0.67
COL5A3-201ENST00000264828 GPR101Q96P66 508 aaPredicted RBP19.24■□□□□ 0.67
COL5A3-201ENST00000264828 HEY1Q9Y5J3 304 aa19.24■□□□□ 0.67
COL5A3-201ENST00000264828 ATP8B3O60423 1300 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 PRR29P0C7W0 189 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 MECOMQ03112 1051 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 MTRQ99707 1265 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 HDAC6Q9UBN7 1215 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 OSBPP22059 807 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 USP14P54578 494 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 KCNA1Q09470 495 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 LRRC14Q15048 493 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 NKX1-1Q15270 411 aaPredicted RBP19.23■□□□□ 0.67
COL5A3-201ENST00000264828 ARL13BQ3SXY8 428 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 MMS22LQ6ZRQ5 1243 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 MARCH10Q8NA82 808 aaPredicted RBP19.23■□□□□ 0.67
COL5A3-201ENST00000264828 DHX38Q92620 1227 aaKnown RBP19.23■□□□□ 0.67
COL5A3-201ENST00000264828 ZNF335Q9H4Z2 1342 aaPredicted RBP19.23■□□□□ 0.67
COL5A3-201ENST00000264828 NLRP10Q86W26 655 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 TTC30BQ8N4P2 665 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 POLD4Q9HCU8 107 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 TTLL11Q8NHH1 800 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 ZBTB18Q99592 522 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 SUN2Q9UH99 717 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 SRP68Q9UHB9 627 aaKnown RBP19.23■□□□□ 0.67
COL5A3-201ENST00000264828 USP27XA6NNY8 438 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 SYF2O95926 243 aaKnown RBP19.23■□□□□ 0.67
COL5A3-201ENST00000264828 CEP72Q9P209 647 aa19.23■□□□□ 0.67
COL5A3-201ENST00000264828 ADD3Q9UEY8 706 aaKnown RBP19.23■□□□□ 0.67
COL5A3-201ENST00000264828 CDC42BPBQ9Y5S2 1711 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 ERCC6L2Q5T890 1561 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 PIGBQ92521 554 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 ZMAT2Q96NC0 199 aaKnown RBP19.22■□□□□ 0.67
COL5A3-201ENST00000264828 KLHL8Q9P2G9 620 aaPredicted RBP19.22■□□□□ 0.67
COL5A3-201ENST00000264828 TSR3Q9UJK0 312 aaKnown RBP19.22■□□□□ 0.67
COL5A3-201ENST00000264828 TRPM1Q7Z4N2 1603 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 PNMA6FA0A0J9YX94 578 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 DRP2Q13474 957 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 KIAA1841Q6NSI8 718 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 ING2Q9H160 280 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 ADAM22Q9P0K1 906 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 CCDC188H7C350 402 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 DSTYKQ6XUX3 929 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 QRICH2Q9H0J4 1663 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 POTEMA6NI47 508 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 PPP4R3CPQ6ZMV5 832 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 ACAD11Q709F0 780 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 SNX19Q92543 992 aa19.22■□□□□ 0.67
COL5A3-201ENST00000264828 SYNGAP1Q96PV0 1343 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 KRT33BQ14525 404 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 EXOC8Q8IYI6 725 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 CCDC90BQ9GZT6 254 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 DIS3Q9Y2L1 958 aaKnown RBP19.21■□□□□ 0.67
COL5A3-201ENST00000264828 hCG_2014768A0A024R1R8 64 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 DNAJC6O75061 913 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 MKRN3Q13064 507 aaKnown RBP19.21■□□□□ 0.67
COL5A3-201ENST00000264828 PAMP19021 973 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 CDK8P49336 464 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 FSCBQ5H9T9 825 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 THNSL1Q8IYQ7 743 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 TGS1Q96RS0 853 aaKnown RBP19.21■□□□□ 0.67
COL5A3-201ENST00000264828 SYNDIG1LA6NDD5 238 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 DAB2P98082 770 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 OCA2Q04671 838 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 ANP32DO95626 131 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 TMC4Q7Z404 712 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 TRMT2AQ8IZ69 625 aaKnown RBP19.21■□□□□ 0.67
COL5A3-201ENST00000264828 ZNF710Q8N1W2 664 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 RNF25Q96BH1 459 aaPredicted RBP19.21■□□□□ 0.67
COL5A3-201ENST00000264828 FAM161BQ96MY7 647 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 TEKT2Q9UIF3 430 aa19.21■□□□□ 0.67
COL5A3-201ENST00000264828 K7ERI5 159 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 SNX2O60749 519 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 HAUS5O94927 633 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 PYGBP11216 843 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 GCLMP48507 274 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 ARMCX2Q7L311 632 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 RASSF3Q86WH2 238 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 PALLDQ8WX93 1383 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 ERVV-1B6SEH8 477 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 COPS2P61201 443 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 PPP2R2AP63151 447 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 FLOT2Q14254 428 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 SFR1Q86XK3 245 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 DIAPH2O60879 1101 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 ESRRBO95718 433 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 SSTR3P32745 418 aaPredicted RBP19.2■□□□□ 0.66
COL5A3-201ENST00000264828 NAA30Q147X3 362 aaPredicted RBP19.2■□□□□ 0.66
COL5A3-201ENST00000264828 SLC27A3Q5K4L6 730 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 CYP4F11Q9HBI6 524 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 NEDD4P46934 1319 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 PRCPP42785 496 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 NECTIN1Q15223 517 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 NLRP14Q86W24 1093 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 EDEM3Q9BZQ6 932 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 LMCD1Q9NZU5 365 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 LGALS16A8MUM7 142 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 CCNA1P78396 465 aa19.2■□□□□ 0.66
COL5A3-201ENST00000264828 NUP85Q9BW27 656 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms