RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 HAUS6Q7Z4H7 955 aa15.04■□□□□ -0
CDH3-201ENST00000264012 SAAL1Q96ER3 474 aa15.04■□□□□ -0
CDH3-201ENST00000264012 INTS2Q9H0H0 1204 aaKnown RBP15.04■□□□□ -0
CDH3-201ENST00000264012 CUL1Q13616 776 aa15.04■□□□□ -0
CDH3-201ENST00000264012 ADSSL1Q8N142 457 aa15.04■□□□□ -0
CDH3-201ENST00000264012 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.04■□□□□ -0
CDH3-201ENST00000264012 POLR3FQ9H1D9 316 aaPredicted RBP15.04■□□□□ -0
CDH3-201ENST00000264012 TUFT1Q9NNX1 390 aa15.04■□□□□ -0
CDH3-201ENST00000264012 TUBE1Q9UJT0 475 aa15.04■□□□□ -0
CDH3-201ENST00000264012 CPP00450 1065 aa15.03■□□□□ -0
CDH3-201ENST00000264012 PSMA2P25787 234 aa15.03■□□□□ -0
CDH3-201ENST00000264012 NNTQ13423 1086 aa15.03■□□□□ -0
CDH3-201ENST00000264012 TTLL4Q14679 1199 aa15.03■□□□□ -0
CDH3-201ENST00000264012 KRT39Q6A163 491 aa15.03■□□□□ -0
CDH3-201ENST00000264012 MICALL2Q8IY33 904 aa15.03■□□□□ -0
CDH3-201ENST00000264012 CCDC68Q9H2F9 335 aa15.03■□□□□ -0
CDH3-201ENST00000264012 ZNF699Q32M78 642 aa15.03■□□□□ -0
CDH3-201ENST00000264012 ALS2CLQ60I27 953 aa15.03■□□□□ -0
CDH3-201ENST00000264012 RNF10Q8N5U6 811 aaKnown RBP15.03■□□□□ -0
CDH3-201ENST00000264012 NGRNQ9NPE2 291 aaKnown RBP15.03■□□□□ -0
CDH3-201ENST00000264012 LIMA1Q9UHB6 759 aaKnown RBP15.03■□□□□ -0
CDH3-201ENST00000264012 ARHGEF37A1IGU5 675 aa15.03■□□□□ -0
CDH3-201ENST00000264012 ARHGEF18Q6ZSZ5 1173 aa15.03■□□□□ -0
CDH3-201ENST00000264012 MAP3K14Q99558 947 aa15.03■□□□□ -0
CDH3-201ENST00000264012 ZNF70Q9UC06 446 aaPredicted RBP15.03■□□□□ -0
CDH3-201ENST00000264012 ABT1Q9ULW3 272 aaKnown RBP15.03■□□□□ -0
CDH3-201ENST00000264012 PDXKO00764 312 aa15.03■□□□□ -0
CDH3-201ENST00000264012 PNMA6AP0CW24 399 aaPredicted RBP15.03■□□□□ -0
CDH3-201ENST00000264012 NMT1P30419 496 aaKnown RBP15.03■□□□□ -0
CDH3-201ENST00000264012 TROAPQ12815 778 aa15.03■□□□□ -0
CDH3-201ENST00000264012 TSNAXIP1Q2TAA8 658 aa15.03■□□□□ -0
CDH3-201ENST00000264012 PASD1Q8IV76 773 aa15.03■□□□□ -0
CDH3-201ENST00000264012 CFAP57Q96MR6 1250 aa15.03■□□□□ -0
CDH3-201ENST00000264012 LRFN2Q9ULH4 789 aa15.03■□□□□ -0
CDH3-201ENST00000264012 PRR12Q9ULL5 1215 aa15.03■□□□□ -0
CDH3-201ENST00000264012 DIS3Q9Y2L1 958 aaKnown RBP15.03■□□□□ -0
CDH3-201ENST00000264012 MSH2P43246 934 aa15.02■□□□□ -0
CDH3-201ENST00000264012 TNFAIP2Q03169 654 aa15.02■□□□□ -0
CDH3-201ENST00000264012 RPS6KA2Q15349 733 aa15.02■□□□□ -0
CDH3-201ENST00000264012 GLE1Q53GS7 698 aaKnown RBP15.02■□□□□ -0
CDH3-201ENST00000264012 LPAR1Q92633 364 aa15.02■□□□□ -0
CDH3-201ENST00000264012 TOPORSQ9NS56 1045 aaPredicted RBP15.02■□□□□ -0
CDH3-201ENST00000264012 CAPN11Q9UMQ6 739 aa15.02■□□□□ -0
CDH3-201ENST00000264012 ITSN1Q15811 1721 aa15.02■□□□□ -0
CDH3-201ENST00000264012 WDR46O15213 610 aaKnown RBP15.02■□□□□ -0
CDH3-201ENST00000264012 PPP4CP60510 307 aa15.02■□□□□ -0
CDH3-201ENST00000264012 TMED2Q15363 201 aa15.02■□□□□ -0
CDH3-201ENST00000264012 CDO1Q16878 200 aa15.02■□□□□ -0
CDH3-201ENST00000264012 FRMD5Q7Z6J6 570 aa15.02■□□□□ -0
CDH3-201ENST00000264012 RHPN2Q8IUC4 686 aa15.02■□□□□ -0
CDH3-201ENST00000264012 LMNTD2Q8IXW0 634 aa15.02■□□□□ -0
CDH3-201ENST00000264012 DNAAF3Q8N9W5 541 aa15.02■□□□□ -0
CDH3-201ENST00000264012 KCNB2Q92953 911 aa15.02■□□□□ -0
CDH3-201ENST00000264012 C7orf25Q9BPX7 421 aa15.02■□□□□ -0
CDH3-201ENST00000264012 C11orf70Q9BRQ4 267 aa15.02■□□□□ -0
CDH3-201ENST00000264012 ZWILCHQ9H900 591 aa15.02■□□□□ -0
CDH3-201ENST00000264012 SYNGAP1Q96PV0 1343 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 NPHP3-ACAD11A0A0J9YXS1 232 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 A0A1B0GTH6 734 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 RASGRF2O14827 1237 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 SUN1O94901 812 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 RHOBTB3O94955 611 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 ZRANB2O95218 330 aaKnown RBP eCLIP15.02□□□□□ -0.01
CDH3-201ENST00000264012 EDEM3Q9BZQ6 932 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 ZMYND12Q9H0C1 365 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 CNOT7Q9UIV1 285 aaKnown RBP15.02□□□□□ -0.01
CDH3-201ENST00000264012 ZNF18P17022 549 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 NXNQ6DKJ4 435 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 RSBN1LQ6PCB5 846 aaPredicted RBP15.02□□□□□ -0.01
CDH3-201ENST00000264012 DSTYKQ6XUX3 929 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 FAM151AQ8WW52 585 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 EXOC4Q96A65 974 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 SLC9A2Q9UBY0 812 aa15.02□□□□□ -0.01
CDH3-201ENST00000264012 CTNND1O60716 968 aaKnown RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 MYL3P08590 195 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 ECE1P42892 770 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 COG2Q14746 738 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 MTF1Q14872 753 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 BBS9Q3SYG4 887 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 ZNF746Q6NUN9 644 aaPredicted RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 BBS5Q8N3I7 341 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 C2orf40Q9H1Z8 148 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 JMJD4Q9H9V9 463 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 TBK1Q9UHD2 729 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 TACC3Q9Y6A5 838 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 EMSYQ7Z589 1322 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 SPDYE16A6NNV3 312 aaPredicted RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 TBX3O15119 743 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 PFDN6O15212 129 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 SRGAP2BP0DMP2 458 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 LIG3P49916 1009 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 STK4Q13043 487 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 ZKSCAN8Q15776 578 aaPredicted RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 SPDYE2Q495Y8 402 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 ZNF668Q96K58 619 aaPredicted RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 PPP1R12CQ9BZL4 782 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 TMEM60Q9H2L4 133 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 VCPKMTQ9H867 229 aa15.01□□□□□ -0.01
CDH3-201ENST00000264012 NOVA2Q9UNW9 492 aaKnown RBP15.01□□□□□ -0.01
CDH3-201ENST00000264012 COL3A1P02461 1466 aaPredicted RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms