RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 NPEPPSP55786 919 aa18.02■□□□□ 0.48
USE1-201ENST00000263897 SAFBQ15424 915 aaKnown RBP eCLIP18.02■□□□□ 0.48
USE1-201ENST00000263897 NCAPH2Q6IBW4 605 aa18.02■□□□□ 0.48
USE1-201ENST00000263897 C4orf19Q8IY42 314 aa18.02■□□□□ 0.48
USE1-201ENST00000263897 JPH2Q9BR39 696 aaPredicted RBP18.02■□□□□ 0.48
USE1-201ENST00000263897 ELAC1Q9H777 363 aaKnown RBP18.02■□□□□ 0.48
USE1-201ENST00000263897 SH2B1Q9NRF2 756 aaPredicted RBP18.02■□□□□ 0.48
USE1-201ENST00000263897 RGL1Q9NZL6 768 aa18.02■□□□□ 0.48
USE1-201ENST00000263897 SUCLA2Q9P2R7 463 aaPredicted RBP18.02■□□□□ 0.48
USE1-201ENST00000263897 WRAP73Q9P2S5 460 aaPredicted RBP18.02■□□□□ 0.48
USE1-201ENST00000263897 MRPL42Q9Y6G3 142 aaKnown RBP18.02■□□□□ 0.48
USE1-201ENST00000263897 TCF20Q9UGU0 1960 aaKnown RBP18.02■□□□□ 0.47
USE1-201ENST00000263897 REV3LO60673 3130 aa18.02■□□□□ 0.47
USE1-201ENST00000263897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.01■□□□□ 0.47
USE1-201ENST00000263897 WNT7AO00755 349 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 GRM6O15303 877 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 ZSCAN20P17040 1043 aaPredicted RBP18.01■□□□□ 0.47
USE1-201ENST00000263897 GUCY1B3Q02153 619 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 PAN2Q504Q3 1202 aaKnown RBP18.01■□□□□ 0.47
USE1-201ENST00000263897 FAM102BQ5T8I3 360 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 PLA2G4FQ68DD2 849 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 ZNF579Q8NAF0 562 aaKnown RBP18.01■□□□□ 0.47
USE1-201ENST00000263897 IL27Q8NEV9 243 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 NLRP7Q8WX94 980 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 P2RX5Q93086 422 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 DYDC2Q96IM9 177 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 C8orf76Q96K31 380 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 SCLT1Q96NL6 688 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 GCOM2Q9BZD3 368 aaPredicted RBP18.01■□□□□ 0.47
USE1-201ENST00000263897 LMAN2LQ9H0V9 348 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 TMEM161AQ9NX61 479 aa18.01■□□□□ 0.47
USE1-201ENST00000263897 BDP1A6H8Y1 2624 aa18■□□□□ 0.47
USE1-201ENST00000263897 SLITRK3O94933 977 aa18■□□□□ 0.47
USE1-201ENST00000263897 KCNQ1P51787 676 aa18■□□□□ 0.47
USE1-201ENST00000263897 HMGN5P82970 282 aaKnown RBP18■□□□□ 0.47
USE1-201ENST00000263897 CALCRLQ16602 461 aa18■□□□□ 0.47
USE1-201ENST00000263897 TIGD5Q53EQ6 642 aa18■□□□□ 0.47
USE1-201ENST00000263897 NAALADL2Q58DX5 795 aa18■□□□□ 0.47
USE1-201ENST00000263897 OTUD6AQ7L8S5 288 aa18■□□□□ 0.47
USE1-201ENST00000263897 EXOC8Q8IYI6 725 aa18■□□□□ 0.47
USE1-201ENST00000263897 FBXO18Q8NFZ0 1043 aa18■□□□□ 0.47
USE1-201ENST00000263897 ADAMTS19Q8TE59 1207 aa18■□□□□ 0.47
USE1-201ENST00000263897 CEP170P1Q96L14 293 aa18■□□□□ 0.47
USE1-201ENST00000263897 MTMR9Q96QG7 549 aa18■□□□□ 0.47
USE1-201ENST00000263897 HSD17B14Q9BPX1 270 aa18■□□□□ 0.47
USE1-201ENST00000263897 LXNQ9BS40 222 aa18■□□□□ 0.47
USE1-201ENST00000263897 ZSWIM4Q9H7M6 989 aa18■□□□□ 0.47
USE1-201ENST00000263897 TTC12Q9H892 705 aaPredicted RBP18■□□□□ 0.47
USE1-201ENST00000263897 ATP6V0A4Q9HBG4 840 aa18■□□□□ 0.47
USE1-201ENST00000263897 PLAGL2Q9UPG8 496 aa18■□□□□ 0.47
USE1-201ENST00000263897 PPME1Q9Y570 386 aa18■□□□□ 0.47
USE1-201ENST00000263897 FNDC1Q4ZHG4 1894 aaPredicted RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 A0A087WZ62 844 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 TBKBP1A7MCY6 615 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 NEMFO60524 1076 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 CSDE1O75534 798 aaKnown RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 FGFR4P22455 802 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 YWHABP31946 246 aaKnown RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 TXKP42681 527 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 CTTNQ14247 550 aaKnown RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 RHPN2Q8IUC4 686 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 TPH2Q8IWU9 490 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 SLC7A3Q8WY07 619 aa17.99■□□□□ 0.47
USE1-201ENST00000263897 EIF2AK1Q9BQI3 630 aaKnown RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 FDXACB1Q9BRP7 624 aaPredicted RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 INO80BQ9C086 356 aaPredicted RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 DHX33Q9H6R0 707 aaKnown RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 UBE2ZQ9H832 354 aaPredicted RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 ALG13Q9NP73 1137 aaKnown RBP17.99■□□□□ 0.47
USE1-201ENST00000263897 ZBTB39O15060 712 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 ITGB1P05556 798 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 ATP2B1P20020 1258 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 RFC5P40937 340 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 CYP4A11Q02928 519 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 RABEP1Q15276 862 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 XKR9Q5GH70 373 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 TCEAL5Q5H9L2 206 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 KSR1Q8IVT5 923 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 KLHL23Q8NBE8 558 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 SPPL3Q8TCT6 385 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 FOXP1Q9H334 677 aaPredicted RBP17.98■□□□□ 0.47
USE1-201ENST00000263897 NSUN3Q9H649 340 aaKnown RBP17.98■□□□□ 0.47
USE1-201ENST00000263897 CHST12Q9NRB3 414 aa17.98■□□□□ 0.47
USE1-201ENST00000263897 VCANP13611 3396 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 A0A0U1RQF3 1178 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 TNFRSF10AO00220 468 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 LYPLA2O95372 231 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 FGFR1P11362 822 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 POLGP54098 1239 aaPredicted RBP17.97■□□□□ 0.47
USE1-201ENST00000263897 CAMK1Q14012 370 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 ECHDC2Q86YB7 292 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 FAM184AQ8NB25 1140 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 PRPF31Q8WWY3 499 aaKnown RBP17.97■□□□□ 0.47
USE1-201ENST00000263897 UHRF1Q96T88 793 aaPredicted RBP17.97■□□□□ 0.47
USE1-201ENST00000263897 TMEM60Q9H2L4 133 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 TYW1Q9NV66 732 aaKnown RBP17.97■□□□□ 0.47
USE1-201ENST00000263897 DACT1Q9NYF0 836 aa17.97■□□□□ 0.47
USE1-201ENST00000263897 KIAA1671Q9BY89 1806 aa17.96■□□□□ 0.47
USE1-201ENST00000263897 HOXA2O43364 376 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms