RNA–Protein interactions for RNA: ENST00000263102.6

CCDC6-201, Transcript of coiled-coil domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC6, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-201ENST00000263102 PPP1R2P3Q6NXS1 205 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 TMEM270Q6UE05 265 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 TOGARAM2Q6ZUX3 1019 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 EIF2AQ9BY44 585 aaKnown RBP15.89■□□□□ 0.13
CCDC6-201ENST00000263102 TOP2BQ02880 1626 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 RNF123Q5XPI4 1314 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 A0A087WWV3 80 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 KRT87PA6NCN2 255 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 ZNF197O14709 1029 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 SEC24BO95487 1268 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 CASP14P31944 242 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 FOXP4Q8IVH2 680 aaPredicted RBP15.89■□□□□ 0.13
CCDC6-201ENST00000263102 MB21D1Q8N884 522 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 CARD14Q9BXL6 1004 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 ASNSD1Q9NWL6 643 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 MID2Q9UJV3 735 aa15.89■□□□□ 0.13
CCDC6-201ENST00000263102 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.89■□□□□ 0.13
CCDC6-201ENST00000263102 LRRC23Q53EV4 343 aaPredicted RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 OTUB1Q96FW1 271 aaPredicted RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.88■□□□□ 0.135e-7■■■□□ 18.9
CCDC6-201ENST00000263102 POLR3FQ9H1D9 316 aaPredicted RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 FAM47DPA6NHR8 397 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 ZMYND10O75800 440 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 ESRRGP62508 458 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 UBE3AQ05086 875 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 PDCLQ13371 301 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 CCHCR1Q8TD31 782 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 NSUN6Q8TEA1 469 aaKnown RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 EAF2Q96CJ1 260 aaPredicted RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 HEMGNQ9BXL5 484 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 CAPS2Q9BXY5 557 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 UPF3AQ9H1J1 476 aaKnown RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 BHMT2Q9H2M3 363 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 ENTPD7Q9NQZ7 604 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 GABBR1Q9UBS5 961 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 TRAPPC8Q9Y2L5 1435 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 SYCE1LA8MT33 242 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 CELF2O95319 508 aaKnown RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 TCP1P17987 556 aaKnown RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 LRRC74AQ0VAA2 488 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 TJAP1Q5JTD0 557 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 SPATA1Q5VX52 437 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 DYNC1LI2O43237 492 aaPredicted RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 SH3TC2Q8TF17 1288 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 BHMTQ93088 406 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 PCDHB7Q9Y5E2 793 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 CHL1O00533 1208 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 FAM133BQ5BKY9 247 aaKnown RBP15.88■□□□□ 0.13
CCDC6-201ENST00000263102 PI16Q6UXB8 463 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 AP1M1Q9BXS5 423 aa15.88■□□□□ 0.13
CCDC6-201ENST00000263102 IQANK1A0A1B0GTG1 560 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 SUN1O94901 812 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 EFHC2Q5JST6 749 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 OOSP2Q86WS3 158 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 PCDHGB4Q9UN71 923 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 UBE3CQ15386 1083 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 TTC17Q96AE7 1141 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 GRIN3BO60391 1043 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 PFKFB2O60825 505 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 ARHGEF7Q14155 803 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 APPL2Q8NEU8 664 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 CCDC90BQ9GZT6 254 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 ABCC12Q96J65 1359 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 PCP11498 1178 aaKnown RBP15.87■□□□□ 0.13
CCDC6-201ENST00000263102 BRD2P25440 801 aaKnown RBP15.87■□□□□ 0.13
CCDC6-201ENST00000263102 MGAT5BQ3V5L5 792 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 C8orf34Q49A92 452 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 E4F1Q66K89 784 aaPredicted RBP15.87■□□□□ 0.13
CCDC6-201ENST00000263102 C1orf131Q8NDD1 294 aaKnown RBP15.87■□□□□ 0.13
CCDC6-201ENST00000263102 TSSK1BQ9BXA7 367 aa15.87■□□□□ 0.13
CCDC6-201ENST00000263102 MLH3Q9UHC1 1453 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 ATXN7L3BQ96GX2 97 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 ZNF512Q96ME7 567 aaPredicted RBP15.86■□□□□ 0.13
CCDC6-201ENST00000263102 CYTH2Q99418 400 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 RPAP3Q9H6T3 665 aaPredicted RBP15.86■□□□□ 0.13
CCDC6-201ENST00000263102 MAGEF1Q9HAY2 307 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 EPB41L5Q9HCM4 733 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 PALLDQ8WX93 1383 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 RFX3P48380 749 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 TRPV6Q9H1D0 765 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 EPN1Q9Y6I3 576 aaPredicted RBP15.86■□□□□ 0.13
CCDC6-201ENST00000263102 A0A0G2JLW4 131 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 HMGCS2P54868 508 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 SKOR1P84550 965 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 ZC4H2Q9NQZ6 224 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 STAP1Q9ULZ2 295 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 ZNF335Q9H4Z2 1342 aaPredicted RBP15.86■□□□□ 0.13
CCDC6-201ENST00000263102 THOC2Q8NI27 1593 aaKnown RBP15.86■□□□□ 0.13
CCDC6-201ENST00000263102 NBPF26B4DH59 902 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 PDIA3P30101 505 aaKnown RBP15.86■□□□□ 0.13
CCDC6-201ENST00000263102 KRT72Q14CN4 511 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 PHKG1Q16816 387 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 HAUS6Q7Z4H7 955 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 FOPNLQ96NB1 174 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 LRRC37BQ96QE4 947 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 TLR7Q9NYK1 1049 aaKnown RBP15.86■□□□□ 0.13
CCDC6-201ENST00000263102 PCDHB8Q9UN66 801 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 PCDHA7Q9UN72 937 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 PRELPP51888 382 aa15.86■□□□□ 0.13
CCDC6-201ENST00000263102 ATXN3P54252 364 aaPredicted RBP15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms