RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 VTI1AQ96AJ9 217 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 GSDMAQ96QA5 445 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 FUCA2Q9BTY2 467 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 EXOC1Q9NV70 894 aa30.43■■■□□ 2.46
SMARCD3-201ENST00000262188 SCN10AQ9Y5Y9 1956 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 KPNA6O60684 536 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 TBCAO75347 108 aaKnown RBP30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 MAFO75444 373 aaPredicted RBP30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 CLCN3P51790 818 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 DPCR1Q3MIW9 517 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 HERC4Q5GLZ8 1057 aaPredicted RBP30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 ZNF484Q5JVG2 852 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 METTL13Q8N6R0 699 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 SLC7A3Q8WY07 619 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 BSNDQ8WZ55 320 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 PDLIM2Q96JY6 352 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 MAPK8IP1Q9UQF2 711 aa30.42■■■□□ 2.46
SMARCD3-201ENST00000262188 FAM13AO94988 1023 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 MORC3Q14149 939 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 KATNAL1Q9BW62 490 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 SLC39A2Q9NP94 309 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 KCND2Q9NZV8 630 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 FRMD3A2A2Y4 597 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 STK4Q13043 487 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 FAM47CQ5HY64 1035 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 CCDC65Q8IXS2 484 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 MYCT1Q8N699 235 aa30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 ZNF668Q96K58 619 aaPredicted RBP30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 POLR3FQ9H1D9 316 aaPredicted RBP30.41■■■□□ 2.46
SMARCD3-201ENST00000262188 C7orf31Q8N865 590 aa30.4■■■□□ 2.46
SMARCD3-201ENST00000262188 ARRDC4Q8NCT1 418 aa30.4■■■□□ 2.46
SMARCD3-201ENST00000262188 U2AF1L4Q8WU68 220 aaKnown RBP30.4■■■□□ 2.46
SMARCD3-201ENST00000262188 ZKSCAN5Q9Y2L8 839 aa30.4■■■□□ 2.46
SMARCD3-201ENST00000262188 KAT6AQ92794 2004 aa30.4■■■□□ 2.46
SMARCD3-201ENST00000262188 EVPLQ92817 2033 aa30.4■■■□□ 2.46
SMARCD3-201ENST00000262188 TRIP12Q14669 1992 aaPredicted RBP30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 PVALEFA0A1B0GWK0 134 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 EHHADHQ08426 723 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 EFCAB12Q6NXP0 572 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 MTHFD1LQ6UB35 978 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 OGDHLQ9ULD0 1010 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 A0A1W2PQ45 241 aaPredicted RBP30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 A0A1W2PQY0 241 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 RHOBTB3O94955 611 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 RFC5P40937 340 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 C11orf57Q6ZUT1 292 aaPredicted RBP30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 KSR1Q8IVT5 923 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 KIAA0895Q8NCT3 520 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 ASAP3Q8TDY4 903 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 PPP1R16BQ96T49 567 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 KIFC3Q9BVG8 833 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 PARVGQ9HBI0 331 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 ODF2LQ9ULJ1 636 aa30.39■■■□□ 2.46
SMARCD3-201ENST00000262188 MYH11P35749 1972 aa30.39■■■□□ 2.45
SMARCD3-201ENST00000262188 TREHO43280 583 aa30.38■■■□□ 2.45
SMARCD3-201ENST00000262188 CASP5P51878 434 aa30.38■■■□□ 2.45
SMARCD3-201ENST00000262188 KCNB1Q14721 858 aa30.38■■■□□ 2.45
SMARCD3-201ENST00000262188 MKI67P46013 3256 aaKnown RBP30.38■■■□□ 2.45
SMARCD3-201ENST00000262188 IGKV6-21A0A0C4DH24 114 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 KBTBD13C9JR72 458 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 CD44P16070 742 aaKnown RBP30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 ZNF131P52739 623 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 NLRP12P59046 1061 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 RUFY4Q6ZNE9 571 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 MCPH1Q8NEM0 835 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 PRIMPOLQ96LW4 560 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 DNAJC25Q9H1X3 360 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 PCDHA2Q9Y5H9 948 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 COL4A3BPQ9Y5P4 624 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 COL1A2P08123 1366 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 TFRCP02786 760 aaKnown RBP30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 NMT1P30419 496 aaKnown RBP30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 PEX3P56589 373 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 ZNF445P59923 1031 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 ODR4Q5SWX8 454 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 GDF6Q6KF10 455 aaPredicted RBP30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 LRSAM1Q6UWE0 723 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 MYRIPQ8NFW9 859 aa30.37■■■□□ 2.45
SMARCD3-201ENST00000262188 NRCAMQ92823 1304 aa30.36■■■□□ 2.45
SMARCD3-201ENST00000262188 SGPL1O95470 568 aa30.36■■■□□ 2.45
SMARCD3-201ENST00000262188 GTF2F1P35269 517 aaKnown RBP eCLIP30.36■■■□□ 2.45
SMARCD3-201ENST00000262188 FAM26FQ5R3K3 315 aa30.36■■■□□ 2.45
SMARCD3-201ENST00000262188 NFRKBQ6P4R8 1299 aa30.36■■■□□ 2.45
SMARCD3-201ENST00000262188 FIZ1Q96SL8 496 aa30.36■■■□□ 2.45
SMARCD3-201ENST00000262188 RMND1Q9NWS8 449 aa30.36■■■□□ 2.45
SMARCD3-201ENST00000262188 C17orf102A2RUQ5 167 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 MOXD2PA6NHM9 499 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 CCDC192P0DO97 292 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 CDK11BP21127 795 aaKnown RBP30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 ADAM17P78536 824 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 ITGA7Q13683 1181 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 ANO6Q4KMQ2 910 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 PRPF31Q8WWY3 499 aaKnown RBP30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 DRC1Q96MC2 740 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 GLT1D1Q96MS3 346 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 TSEN34Q9BSV6 310 aaKnown RBP30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 DNM1LO00429 736 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 MYBP10242 640 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 GLRA2P23416 452 aa30.35■■■□□ 2.45
SMARCD3-201ENST00000262188 ARL2P36404 184 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms