RNA–Protein interactions for RNA: ENST00000261965.7

TUBGCP3-201, Transcript of tubulin gamma complex associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBGCP3, Length 3,899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-201ENST00000261965 PSMD2Q13200 908 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 RNF10Q8N5U6 811 aaKnown RBP15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 WHAMMQ8TF30 809 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 SCAF8Q9UPN6 1271 aaKnown RBP15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 ATP11AP98196 1134 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 LRCH2Q5VUJ6 765 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 SPDL1Q96EA4 605 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 RUSC1Q9BVN2 902 aa15.15■□□□□ 0.02
TUBGCP3-201ENST00000261965 NR3C1P04150 777 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 HNRNPH3P31942 346 aaKnown RBP15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 ADCY8P40145 1251 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 C2CD6Q53TS8 623 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 CPXCR1Q8N123 301 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 PSMD1Q99460 953 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 NEUROG2Q9H2A3 272 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 NAGPAQ9UK23 515 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 DIAPH2O60879 1101 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 CERKLQ49MI3 558 aaPredicted RBP15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 ARSHQ5FYA8 562 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 MEI1Q5TIA1 1274 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 MTUS1Q9ULD2 1270 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 TPX2Q9ULW0 747 aaKnown RBP15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 DCDC2CA8MYV0 355 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 CHN1P15882 459 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 PON1P27169 355 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 MTMR3Q13615 1198 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 SMAD1Q15797 465 aaKnown RBP15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 KNOP1Q1ED39 458 aaKnown RBP15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 ASTE1Q2TB18 679 aaPredicted RBP15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 TMEM119Q4V9L6 283 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 SRRM1Q8IYB3 904 aaKnown RBP15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 RAB17Q9H0T7 212 aa15.14■□□□□ 0.01
TUBGCP3-201ENST00000261965 GRIN2DO15399 1336 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 THAP12O43422 761 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 DLATP10515 647 aaKnown RBP15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 PROM2Q8N271 834 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 HAUS1Q96CS2 278 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 NR2E1Q9Y466 385 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 KDM3AQ9Y4C1 1321 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 CCDC160A6NGH7 325 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 ELF1P32519 619 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 GALCP54803 685 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 ICA1Q05084 483 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 SETDB1Q15047 1291 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 LONRF1Q17RB8 773 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 GNPTABQ3T906 1256 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 ZNF365Q70YC5 407 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 CERS5Q8N5B7 392 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 RBM46Q8TBY0 533 aaKnown RBP15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 NEK9Q8TD19 979 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 HOOK2Q96ED9 719 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 VPS37BQ9H9H4 285 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 RABGAP1Q9Y3P9 1069 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 SNED1Q8TER0 1413 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 RASGRF2O14827 1237 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 RPS6KA5O75582 802 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 PAX7P23759 505 aa15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 SARNPP82979 210 aaKnown RBP15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 NUCKS1Q9H1E3 243 aaKnown RBP15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 ALG13Q9NP73 1137 aaKnown RBP15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 TTC7AQ9ULT0 858 aaPredicted RBP15.13■□□□□ 0.01
TUBGCP3-201ENST00000261965 FOXO6A8MYZ6 492 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 CALUO43852 315 aaPredicted RBP15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 GNA14O95837 355 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 CALRP27797 417 aaKnown RBP15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 CDC42EP5Q6NZY7 148 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 CYB5D1Q6P9G0 228 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 SEPT14Q6ZU15 432 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 FAM186BQ8IYM0 893 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 SLC17A8Q8NDX2 589 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 C1orf54Q8WWF1 131 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 IQCDQ96DY2 449 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 SYCP2LQ5T4T6 812 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 RAPGEF5Q92565 580 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 INPP4AQ96PE3 977 aaPredicted RBP15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 A6NNZ2 444 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 FAM86B1E9PN63 330 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 PJA2O43164 708 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 TOM1O60784 492 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 CAND2O75155 1236 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 FAM86B2P0C5J1 330 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 PRLRP16471 622 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 SHMT1P34896 483 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 GIT2Q14161 759 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 TUBB8Q3ZCM7 444 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 ODR4Q5SWX8 454 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 FBXO11Q86XK2 927 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 UBL4BQ8N7F7 174 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 CEP63Q96MT8 703 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 UBE2TQ9NPD8 197 aaPredicted RBP15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 ACP6Q9NPH0 428 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 DNAJC12Q9UKB3 198 aa15.12■□□□□ 0.01
TUBGCP3-201ENST00000261965 EVI5O60447 810 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 ATF7P17544 494 aaPredicted RBP15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 POLD1P28340 1107 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 DRAP1Q14919 205 aaPredicted RBP15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 ZNF662Q6ZS27 426 aa15.11■□□□□ 0.01
TUBGCP3-201ENST00000261965 FAM178BQ8IXR5 827 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms