RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 RDM1Q8NG50 284 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 USP6NLQ92738 828 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 BAG1Q99933 345 aaPredicted RBP20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 WRAP73Q9P2S5 460 aaPredicted RBP20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 CAPN7Q9Y6W3 813 aa20.71■□□□□ 0.91
COL4A3BP-201ENST00000261415 ARIH2O95376 493 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 P4HBP07237 508 aaKnown RBP20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 HOXC6P09630 235 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 MCM3P25205 808 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 AMPD3Q01432 767 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 WDR93Q6P2C0 686 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 B4GALNT4Q76KP1 1039 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 VSTM4Q8IW00 320 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 KCTD17Q8N5Z5 321 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 GIMAP8Q8ND71 665 aaPredicted RBP20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 SOCS4Q8WXH5 440 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 TINF2Q9BSI4 451 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 SUGCTQ9HAC7 445 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 MAN1B1Q9UKM7 699 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 DNM3Q9UQ16 869 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 SH3BP1Q9Y3L3 701 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 TELO2Q9Y4R8 837 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 SYNGAP1Q96PV0 1343 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 A0A1B0GUA9 196 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 A6NNZ2 444 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 SYF2O95926 243 aaKnown RBP20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 NLRP12P59046 1061 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 LACTBP83111 547 aaPredicted RBP20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 SP4Q02446 784 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 NCAPHQ15003 741 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 LY6KQ17RY6 165 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 DPCR1Q3MIW9 517 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 TUBB8Q3ZCM7 444 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 ISM2Q6H9L7 571 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 GSDMAQ96QA5 445 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 CFHR5Q9BXR6 569 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 TRIM9Q9C026 710 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 VTA1Q9NP79 307 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 PCDHA10Q9Y5I2 948 aa20.7■□□□□ 0.9
COL4A3BP-201ENST00000261415 LRRIQ3A6PVS8 624 aaPredicted RBP20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 FARP2O94887 1054 aaPredicted RBP20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 SNAI1O95863 264 aaPredicted RBP20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 PLA2G4BP0C869 781 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 VSNL1P62760 191 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 NAIF1Q69YI7 327 aaPredicted RBP20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 KATNBL1Q9H079 304 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 ZSWIM4Q9H7M6 989 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 PDGFCQ9NRA1 345 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 GJD2Q9UKL4 321 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 FCGRTP55899 365 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 ACTR2P61160 394 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 CCDC62Q6P9F0 684 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 SCFD2Q8WU76 684 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 C7orf25Q9BPX7 421 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 ARHGAP39Q9C0H5 1083 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 RNF186Q9NXI6 227 aa20.69■□□□□ 0.9
COL4A3BP-201ENST00000261415 MYMKA6NI61 221 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 TRPA1O75762 1119 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 KIAA0754O94854 1291 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 GGPS1O95749 300 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 SSBP05455 408 aaKnown RBP eCLIP20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 RGS2P41220 211 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 PSMC4P43686 418 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 QARSP47897 775 aaKnown RBP20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 FNTAP49354 379 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 IRAK1P51617 712 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 TAPT1Q6NXT6 567 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 FAM43BQ6ZT52 329 aaPredicted RBP20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 TRIML1Q8N9V2 468 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 FAM76AQ8TAV0 307 aa20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 PUF60Q9UHX1 559 aaKnown RBP20.68■□□□□ 0.9
COL4A3BP-201ENST00000261415 SERPINC1P01008 464 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 RPN1P04843 607 aaKnown RBP20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 ARHGAP25P42331 645 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 SLC12A3P55017 1021 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 TTLL4Q14679 1199 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 UGCGQ16739 394 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 METTL7BQ6UX53 244 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 PIGOQ8TEQ8 1089 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 TRIM47Q96LD4 638 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 APBA2Q99767 749 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 LRRC27Q9C0I9 530 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 EYA4O95677 639 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 TXNP10599 105 aaKnown RBP20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 CYP2B6P20813 491 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 BMP6P22004 513 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 PAX7P23759 505 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 MORC3Q14149 939 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 SKIDA1Q1XH10 827 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 NACC1Q96RE7 527 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 BHMT2Q9H2M3 363 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 FLRT1Q9NZU1 646 aa20.67■□□□□ 0.9
COL4A3BP-201ENST00000261415 KLRC4O43908 158 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 PSAPP07602 524 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 ASIC1P78348 528 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 PPFIA1Q13136 1202 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 ABHD15Q6UXT9 468 aa20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 SYT2Q8N9I0 419 aaPredicted RBP20.66■□□□□ 0.9
COL4A3BP-201ENST00000261415 BCAS4Q8TDM0 211 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms