RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.3■□□□□ 0.68
SRSF1-201ENST00000258962 CEP290O15078 2479 aa19.3■□□□□ 0.68
SRSF1-201ENST00000258962 A0A1B0GTH6 734 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 DCDC2CA8MYV0 355 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 ACTR2P61160 394 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 TLE2Q04725 743 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 ZSCAN30Q86W11 494 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 MYOCDQ8IZQ8 938 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 EMID1Q96A84 441 aaPredicted RBP19.29■□□□□ 0.68
SRSF1-201ENST00000258962 SPATA33Q96N06 139 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 ZNF830Q96NB3 372 aaPredicted RBP19.29■□□□□ 0.68
SRSF1-201ENST00000258962 MTG1Q9BT17 334 aaPredicted RBP19.29■□□□□ 0.68
SRSF1-201ENST00000258962 KCNF1Q9H3M0 494 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 ZHX3Q9H4I2 956 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 THAP9Q9H5L6 903 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 KCND2Q9NZV8 630 aa19.29■□□□□ 0.68
SRSF1-201ENST00000258962 LIMA1Q9UHB6 759 aaKnown RBP19.29■□□□□ 0.68
SRSF1-201ENST00000258962 ZMYND8Q9ULU4 1186 aaPredicted RBP19.29■□□□□ 0.68
SRSF1-201ENST00000258962 ARHGEF35A5YM69 484 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 ESPNB1AK53 854 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 ARVCFO00192 962 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 SORBS3O60504 671 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 PQBP1O60828 265 aaKnown RBP19.28■□□□□ 0.68
SRSF1-201ENST00000258962 TBCAO75347 108 aaKnown RBP19.28■□□□□ 0.68
SRSF1-201ENST00000258962 UBA1P22314 1058 aaKnown RBP19.28■□□□□ 0.68
SRSF1-201ENST00000258962 GUCY2CP25092 1073 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 RARRES1P49788 294 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 CASP5P51878 434 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 PURAQ00577 322 aaKnown RBP19.28■□□□□ 0.68
SRSF1-201ENST00000258962 KRT31Q15323 416 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 DGKDQ16760 1214 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 TCP11X2Q5H9J9 407 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 PPTC7Q8NI37 304 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 SRRTQ9BXP5 876 aaKnown RBP19.28■□□□□ 0.68
SRSF1-201ENST00000258962 SEZ6LQ9BYH1 1024 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 POLD4Q9HCU8 107 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 ZKSCAN5Q9Y2L8 839 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 MROH7Q68CQ1 1323 aa19.28■□□□□ 0.68
SRSF1-201ENST00000258962 TMEM150BA6NC51 233 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 KCNJ18B7U540 433 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 MMP3P08254 477 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 GAP43P17677 238 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 MSNP26038 577 aaKnown RBP19.27■□□□□ 0.68
SRSF1-201ENST00000258962 YWHABP31946 246 aaKnown RBP19.27■□□□□ 0.68
SRSF1-201ENST00000258962 SP4Q02446 784 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 SPAG1Q07617 926 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 ITGA7Q13683 1181 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 KCNJ12Q14500 433 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 NR1I3Q14994 352 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 PTPN21Q16825 1174 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 ZCWPW2Q504Y3 356 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 ABHD15Q6UXT9 468 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 EPM2AIP1Q7L775 607 aaPredicted RBP19.27■□□□□ 0.68
SRSF1-201ENST00000258962 TMC6Q7Z403 805 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 VSTM4Q8IW00 320 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 CSGALNACT2Q8N6G5 542 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 NOC3LQ8WTT2 800 aaKnown RBP19.27■□□□□ 0.68
SRSF1-201ENST00000258962 SCFD1Q8WVM8 642 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 TOX2Q96NM4 488 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 COL4A3BPQ9Y5P4 624 aa19.27■□□□□ 0.68
SRSF1-201ENST00000258962 NOP56O00567 594 aaKnown RBP19.26■□□□□ 0.67
SRSF1-201ENST00000258962 ZNF862O60290 1169 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 STBD1O95210 358 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 PSAPP07602 524 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 SYN1P17600 705 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 ZNF131P52739 623 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 MAPK7Q13164 816 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 FOXR2Q6PJQ5 311 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 PADI6Q6TGC4 694 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 CYFIP1Q7L576 1253 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 ANKRD33Q7Z3H0 272 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 FILIP1Q7Z7B0 1213 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 PRDM5Q9NQX1 630 aaPredicted RBP19.26■□□□□ 0.67
SRSF1-201ENST00000258962 GABBR1Q9UBS5 961 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 ODF2LQ9ULJ1 636 aa19.26■□□□□ 0.67
SRSF1-201ENST00000258962 LRRC10BA6NIK2 292 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 SFI1A8K8P3 1242 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 TLR3O15455 904 aaKnown RBP19.25■□□□□ 0.67
SRSF1-201ENST00000258962 PPFIA4O75335 1185 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 FAM13AO94988 1023 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 ATG7O95352 703 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 SUPT20HL2P0C7V6 817 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 CDK7P50613 346 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 CHMP4BP1P59074 171 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 LRRC63Q05C16 580 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 METTL7BQ6UX53 244 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 CCDC60Q8IWA6 550 aaPredicted RBP19.25■□□□□ 0.67
SRSF1-201ENST00000258962 DAW1Q8N136 415 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 CTAGE1Q96RT6 745 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 OLFML3Q9NRN5 406 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 ANKEF1Q9NU02 776 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 IMPACTQ9P2X3 320 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 ALPK3Q96L96 1907 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 IGSF9BQ9UPX0 1349 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 BACH1O14867 736 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 TEX33O43247 280 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 HIP1RO75146 1068 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 MYBP10242 640 aa19.25■□□□□ 0.67
SRSF1-201ENST00000258962 COPB1P53618 953 aaKnown RBP19.25■□□□□ 0.67
SRSF1-201ENST00000258962 ARID5BQ14865 1188 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms