RNA–Protein interactions for RNA: ENST00000257548.9

USP30-201, Transcript of ubiquitin specific peptidase 30, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP30, Length 3,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP30-201ENST00000257548 MAGEF1Q9HAY2 307 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 NR2E1Q9Y466 385 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 BZW2Q9Y6E2 419 aaKnown RBP13.28□□□□□ -0.28
USP30-201ENST00000257548 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.28□□□□□ -0.28
USP30-201ENST00000257548 CFAP69A5D8W1 941 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L15C9J2P7 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L13C9JLJ4 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L11C9JVI0 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L18D6R9N7 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L22D6RA61 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L17D6RBQ6 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L19D6RCP7 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L20D6RJB6 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 ECEL1O95672 775 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 ZCCHC18P0CG32 403 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 DLATP10515 647 aaKnown RBP13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L24Q0WX57 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 LRRC23Q53EV4 343 aaPredicted RBP13.28□□□□□ -0.28
USP30-201ENST00000257548 USP17L6PQ6QN14 398 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 ARHGEF18Q6ZSZ5 1173 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 GBP7Q8N8V2 638 aaPredicted RBP13.28□□□□□ -0.28
USP30-201ENST00000257548 PIGOQ8TEQ8 1089 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 SPIRE2Q8WWL2 714 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 CCT6BQ92526 530 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 RUBCNQ92622 972 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 RAD54LQ92698 747 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 BARHL2Q9NY43 387 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 CTNNAL1Q9UBT7 734 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 STK17AQ9UEE5 414 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 PARP2Q9UGN5 583 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 DNAJC12Q9UKB3 198 aa13.28□□□□□ -0.28
USP30-201ENST00000257548 C6orf229H3BNL8 230 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 STXBP3O00186 592 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 GAS8O95995 478 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 UBTFL6P0CB48 400 aaPredicted RBP13.27□□□□□ -0.28
USP30-201ENST00000257548 SNAP25P60880 206 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 KCTD1Q719H9 257 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 NBPF5PQ86XG9 351 aaPredicted RBP13.27□□□□□ -0.28
USP30-201ENST00000257548 SFR1Q86XK3 245 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 C4orf33Q8N1A6 199 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 BHMT2Q9H2M3 363 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.27□□□□□ -0.28
USP30-201ENST00000257548 ZFATQ9P243 1243 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 ARL2BPQ9Y2Y0 163 aa13.27□□□□□ -0.28
USP30-201ENST00000257548 RTCBQ9Y3I0 505 aaKnown RBP13.27□□□□□ -0.28
USP30-201ENST00000257548 DRAP1Q14919 205 aaPredicted RBP13.27□□□□□ -0.29
USP30-201ENST00000257548 PIK3R5Q8WYR1 880 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 BAP1Q92560 729 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 ABTB1Q969K4 478 aaPredicted RBP13.27□□□□□ -0.29
USP30-201ENST00000257548 RUNDC3BQ96NL0 473 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 SMC6Q96SB8 1091 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 TTYH3Q9C0H2 523 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 NT5C3AQ9H0P0 336 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 PSTPIP2Q9H939 334 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 TXLNGQ9NUQ3 528 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 GOLGA8RI6L899 631 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 TLR2O60603 784 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 PFDN1O60925 122 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 FECHP22830 423 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 CETN2P41208 172 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 KLC1Q07866 573 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 FIGNQ5HY92 759 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 RCSD1Q6JBY9 416 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 KCNK18Q7Z418 384 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 FAM186BQ8IYM0 893 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 PPP1R14CQ8TAE6 165 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 TTC1Q99614 292 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 A1CFQ9NQ94 594 aaKnown RBP13.27□□□□□ -0.29
USP30-201ENST00000257548 ZNF652Q9Y2D9 606 aa13.27□□□□□ -0.29
USP30-201ENST00000257548 USP17L5A8MUK1 530 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 SLC37A4O43826 429 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 ATF2P15336 505 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 CCDC62Q6P9F0 684 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 ISLR2Q6UXK2 745 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 UBE2TQ9NPD8 197 aaPredicted RBP13.26□□□□□ -0.29
USP30-201ENST00000257548 EXOC1LA0A1B0GW35 172 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 PVALEFA0A1B0GWK0 134 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 ARHGAP42A6NI28 874 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 GOLGA8SH3BPF8 625 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 GOLGA8MH3BSY2 632 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 ATF7P17544 494 aaPredicted RBP13.26□□□□□ -0.29
USP30-201ENST00000257548 SERPINB4P48594 390 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 UBXN2AP68543 259 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 CDK17Q00537 523 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 XRCC4Q13426 336 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 ERMARDQ5T6L9 678 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 RBM26Q5T8P6 1007 aaKnown RBP13.26□□□□□ -0.29
USP30-201ENST00000257548 CROCCP2Q86T23 111 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 FAM228AQ86W67 206 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 BTBD6Q96KE9 485 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 HOMER2Q9NSB8 354 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 ANAPC5Q9UJX4 755 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 PPP1R9AQ9ULJ8 1098 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 SNUPNO95149 360 aaKnown RBP13.26□□□□□ -0.29
USP30-201ENST00000257548 FERP16591 822 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 RWDD2BP57060 319 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 SLMAPQ14BN4 828 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 MDH1BQ5I0G3 518 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 AGAP1Q9UPQ3 857 aa13.26□□□□□ -0.29
USP30-201ENST00000257548 TNS3Q68CZ2 1445 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms