RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 TRIM9Q9C026 710 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 UPF3AQ9H1J1 476 aaKnown RBP13.39□□□□□ -0.27
NIP7-201ENST00000254940 GINS2Q9Y248 185 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 R3HCC1Q9Y3T6 440 aaKnown RBP13.39□□□□□ -0.27
NIP7-201ENST00000254940 ARID2Q68CP9 1835 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 KDM3AQ9Y4C1 1321 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 A0A1W2PQ45 241 aaPredicted RBP13.39□□□□□ -0.27
NIP7-201ENST00000254940 A0A1W2PQY0 241 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 CDC25BP30305 580 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 RARRES1P49788 294 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 PPFIA1Q13136 1202 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 DNTTIP2Q5QJE6 756 aaKnown RBP13.39□□□□□ -0.27
NIP7-201ENST00000254940 CCSAPQ6IQ19 270 aaPredicted RBP13.39□□□□□ -0.27
NIP7-201ENST00000254940 ARMC5Q96C12 935 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 NACC1Q96RE7 527 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 SLC39A2Q9NP94 309 aa13.39□□□□□ -0.27
NIP7-201ENST00000254940 TRMT13Q9NUP7 481 aaKnown RBP13.39□□□□□ -0.27
NIP7-201ENST00000254940 KBTBD13C9JR72 458 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 CSDE1O75534 798 aaKnown RBP13.38□□□□□ -0.27
NIP7-201ENST00000254940 SGPL1O95470 568 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 SKILP12757 684 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 PKN2Q16513 984 aaKnown RBP13.38□□□□□ -0.27
NIP7-201ENST00000254940 FAM102BQ5T8I3 360 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 TRIML1Q8N9V2 468 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 ATP8B4Q8TF62 1192 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 LMBR1Q8WVP7 490 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 MTG1Q9BT17 334 aaPredicted RBP13.38□□□□□ -0.27
NIP7-201ENST00000254940 KIFC3Q9BVG8 833 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 CYP26B1Q9NR63 512 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 TRMT1Q9NXH9 659 aaKnown RBP13.38□□□□□ -0.27
NIP7-201ENST00000254940 ZNF215Q9UL58 517 aaPredicted RBP13.38□□□□□ -0.27
NIP7-201ENST00000254940 USP20Q9Y2K6 914 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 EMSYQ7Z589 1322 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 MYH11P35749 1972 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 TREHO43280 583 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 EYA4O95677 639 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 F2P00734 622 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 SLC12A3P55017 1021 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 TPM4P67936 248 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 ASIC1P78348 528 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 CCZ1BP86790 482 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 CCZ1P86791 482 aaPredicted RBP13.38□□□□□ -0.27
NIP7-201ENST00000254940 GRIK4Q16099 956 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 XKR3Q5GH77 459 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 RINT1Q6NUQ1 792 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 RUFY4Q6ZNE9 571 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 SV2BQ7L1I2 683 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 C4orf19Q8IY42 314 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 C7orf31Q8N865 590 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 PAWRQ96IZ0 340 aaKnown RBP13.38□□□□□ -0.27
NIP7-201ENST00000254940 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 TRPV6Q9H1D0 765 aa13.38□□□□□ -0.27
NIP7-201ENST00000254940 KLRC1P26715 233 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 POLGP54098 1239 aaPredicted RBP13.37□□□□□ -0.27
NIP7-201ENST00000254940 GDF6Q6KF10 455 aaPredicted RBP13.37□□□□□ -0.27
NIP7-201ENST00000254940 APTXQ7Z2E3 356 aaKnown RBP13.37□□□□□ -0.27
NIP7-201ENST00000254940 KIAA0895Q8NCT3 520 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 RDM1Q8NG50 284 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 AFAP1L1Q8TED9 768 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 NELFBQ8WX92 580 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 DDX12PQ92771 950 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 REEP2Q9BRK0 252 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 TMEM106CQ9BVX2 250 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 STARD7Q9NQZ5 370 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 Q9Y3F1 56 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 CCDC85CA6NKD9 419 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 OFD1O75665 1012 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 CYP11B2P19099 503 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 MNX1P50219 401 aaPredicted RBP13.37□□□□□ -0.27
NIP7-201ENST00000254940 ADKP55263 362 aaKnown RBP13.37□□□□□ -0.27
NIP7-201ENST00000254940 HYIQ5T013 277 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 CEP135Q66GS9 1140 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 PLPPR4Q7Z2D5 763 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 WNT8BQ93098 351 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 CCDC34Q96HJ3 373 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 C16orf45Q96MC5 204 aaPredicted RBP13.37□□□□□ -0.27
NIP7-201ENST00000254940 NRBP2Q9NSY0 501 aa13.37□□□□□ -0.27
NIP7-201ENST00000254940 MSCO60682 206 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 PQBP1O60828 265 aaKnown RBP13.36□□□□□ -0.27
NIP7-201ENST00000254940 VTNP04004 478 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 TBC1D8BQ0IIM8 1120 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 ITGA7Q13683 1181 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 MARCH8Q5T0T0 291 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 ZNF658Q5TYW1 1059 aaPredicted RBP13.36□□□□□ -0.27
NIP7-201ENST00000254940 ARRDC4Q8NCT1 418 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 GLT1D1Q96MS3 346 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 SCN10AQ9Y5Y9 1956 aa13.36□□□□□ -0.27
NIP7-201ENST00000254940 LAMA2P24043 3122 aaKnown RBP13.36□□□□□ -0.27
NIP7-201ENST00000254940 ZEB2O60315 1214 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 HIP1RO75146 1068 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 CTSHP09668 335 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 CYP2C9P11712 490 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 HOXD8P13378 290 aaPredicted RBP13.35□□□□□ -0.27
NIP7-201ENST00000254940 ERCC5P28715 1186 aaPredicted RBP13.35□□□□□ -0.27
NIP7-201ENST00000254940 EMC2Q15006 297 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 SPATA1Q5VX52 437 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 PCSK9Q8NBP7 692 aaKnown RBP13.35□□□□□ -0.27
NIP7-201ENST00000254940 NEK9Q8TD19 979 aa13.35□□□□□ -0.27
NIP7-201ENST00000254940 CPLX3Q8WVH0 158 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms