RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 C17orf75Q9HAS0 396 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 SERTAD1Q9UHV2 236 aa15.66■□□□□ 0.1
VPS25-201ENST00000253794 FRMD3A2A2Y4 597 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 MYMKA6NI61 221 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 ASAP2O43150 1006 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 NR1I2O75469 434 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 MGAT3Q09327 533 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 GIT2Q14161 759 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 MXD4Q14582 209 aaPredicted RBP15.65■□□□□ 0.1
VPS25-201ENST00000253794 ZNF410Q86VK4 478 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 METTL13Q8N6R0 699 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 DNAJB3Q8WWF6 145 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 DNAJC19Q96DA6 116 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 DRC1Q96MC2 740 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 REEP2Q9BRK0 252 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 TRIM9Q9C026 710 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 SUGCTQ9HAC7 445 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 SUCLA2Q9P2R7 463 aaPredicted RBP15.65■□□□□ 0.1
VPS25-201ENST00000253794 SQORQ9Y6N5 450 aa15.65■□□□□ 0.1
VPS25-201ENST00000253794 HIP1RO75146 1068 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 GPR32O75388 356 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 SSBP05455 408 aaKnown RBP eCLIP15.64■□□□□ 0.09
VPS25-201ENST00000253794 CKBP12277 381 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 MRPS6P82932 125 aaKnown RBP15.64■□□□□ 0.09
VPS25-201ENST00000253794 MDM2Q00987 491 aaPredicted RBP15.64■□□□□ 0.09
VPS25-201ENST00000253794 FAM43BQ6ZT52 329 aaPredicted RBP15.64■□□□□ 0.09
VPS25-201ENST00000253794 IFNLR1Q8IU57 520 aaPredicted RBP15.64■□□□□ 0.09
VPS25-201ENST00000253794 CNNM3Q8NE01 707 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 PRPF31Q8WWY3 499 aaKnown RBP15.64■□□□□ 0.09
VPS25-201ENST00000253794 DDX12PQ92771 950 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 TMEM143Q96AN5 459 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 PAGE5Q96GU1 130 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 NFKBIZQ9BYH8 718 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 POLR3FQ9H1D9 316 aaPredicted RBP15.64■□□□□ 0.09
VPS25-201ENST00000253794 ADAMTS10Q9H324 1103 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 BMP2KQ9NSY1 1161 aaPredicted RBP15.64■□□□□ 0.09
VPS25-201ENST00000253794 TMEM39AQ9NV64 488 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 COL4A3BPQ9Y5P4 624 aa15.64■□□□□ 0.09
VPS25-201ENST00000253794 TRIM43BA6NCK2 446 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 GTPBP6O43824 516 aaPredicted RBP15.63■□□□□ 0.09
VPS25-201ENST00000253794 PARNO95453 639 aaKnown RBP15.63■□□□□ 0.09
VPS25-201ENST00000253794 SELPP16109 830 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 PTMSP20962 102 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 GLRA2P23416 452 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 GPC3P51654 580 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 LAMTOR4Q0VGL1 99 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 FAM102BQ5T8I3 360 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 ASAP3Q8TDY4 903 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 TRIM43Q96BQ3 446 aaPredicted RBP15.63■□□□□ 0.09
VPS25-201ENST00000253794 CCDC34Q96HJ3 373 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 NTPCRQ9BSD7 190 aaKnown RBP15.63■□□□□ 0.09
VPS25-201ENST00000253794 FAM49AQ9H0Q0 323 aaPredicted RBP15.63■□□□□ 0.09
VPS25-201ENST00000253794 HIPK3Q9H422 1215 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 GPRC5CQ9NQ84 441 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 DACT1Q9NYF0 836 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 KCNG1Q9UIX4 513 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 AKT3Q9Y243 479 aa15.63■□□□□ 0.09
VPS25-201ENST00000253794 EVI5O60447 810 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 KINO60870 393 aaKnown RBP15.62■□□□□ 0.09
VPS25-201ENST00000253794 MBD3O95983 291 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 TIMP1P01033 207 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 CHRNA1P02708 482 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 VTNP04004 478 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 PLS3P13797 630 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 GAP43P17677 238 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 SCP2P22307 547 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 THPOP40225 353 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 NAMPTP43490 491 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 CRYBB1P53674 252 aaPredicted RBP15.62■□□□□ 0.09
VPS25-201ENST00000253794 CAPSQ13938 189 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 DHX8Q14562 1220 aaKnown RBP15.62■□□□□ 0.09
VPS25-201ENST00000253794 PPP2R5AQ15172 486 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 ZNF618Q5T7W0 954 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 CDCA2Q69YH5 1023 aaPredicted RBP15.62■□□□□ 0.09
VPS25-201ENST00000253794 LRRC8DQ7L1W4 858 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 SPIRE2Q8WWL2 714 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 CELF4Q9BZC1 486 aaKnown RBP15.62■□□□□ 0.09
VPS25-201ENST00000253794 WNT8AQ9H1J5 351 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 PARVGQ9HBI0 331 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 SEL1LQ9UBV2 794 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 TRPV2Q9Y5S1 764 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 TANC1Q9C0D5 1861 aa15.62■□□□□ 0.09
VPS25-201ENST00000253794 EVPLQ92817 2033 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 NPHP3-ACAD11A0A0J9YXS1 232 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 PVALEFA0A1B0GWK0 134 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 RSPH10B2B2RC85 870 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 RSPH10BP0C881 870 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 MAPTP10636 758 aaKnown RBP15.61■□□□□ 0.09
VPS25-201ENST00000253794 RFC2P35250 354 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 NLRP11P59045 1033 aaKnown RBP15.61■□□□□ 0.09
VPS25-201ENST00000253794 EHHADHQ08426 723 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 DPYDQ12882 1025 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 TFDP1Q14186 410 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 MBTPS1Q14703 1052 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 RHPN2Q8IUC4 686 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 USP38Q8NB14 1042 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 SPATA20Q8TB22 786 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 GPT2Q8TD30 523 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 BSNDQ8WZ55 320 aa15.61■□□□□ 0.09
VPS25-201ENST00000253794 FIZ1Q96SL8 496 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms