RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 EIF2AK2P19525 551 aaKnown RBP20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 MAPK7Q13164 816 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 GBP6Q6ZN66 633 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 MIER3Q7Z3K6 550 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 ZC3H15Q8WU90 426 aaKnown RBP20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 GDAP1L1Q96MZ0 367 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 RIT2Q99578 217 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 SLC38A10Q9HBR0 1119 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 AFG3L2Q9Y4W6 797 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 SNCAIPQ9Y6H5 919 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 TMEM150BA6NC51 233 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 N4BP1O75113 896 aaKnown RBP20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 MYBL2P10244 700 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 NAB2Q15742 525 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 TKFCQ3LXA3 575 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 HDAC7Q8WUI4 952 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 MS4A14Q96JA4 679 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 AGPAT3Q9NRZ7 376 aa20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 PACSIN2Q9UNF0 486 aaPredicted RBP20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 ZC3H4Q9UPT8 1303 aaKnown RBP20.44■□□□□ 0.86
PDLIM4-201ENST00000253754 TRIM49P0CI25 452 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 TRIM49CP0CI26 452 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 PSMC2P35998 433 aaKnown RBP20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 RNF10Q8N5U6 811 aaKnown RBP20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 SYTL5Q8TDW5 730 aaPredicted RBP20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 WNK4Q96J92 1243 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 TAAR1Q96RJ0 339 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 GBP3Q9H0R5 595 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 TAF1DQ9H5J8 278 aaPredicted RBP20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 SAMM50Q9Y512 469 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 CTDP1Q9Y5B0 961 aaPredicted RBP20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 CSADQ9Y600 493 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 MYH10P35580 1976 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 PRLRP16471 622 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 IQCEQ6IPM2 695 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 PADI6Q6TGC4 694 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 SPATA4Q8NEY3 305 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 CNKSR2Q8WXI2 1034 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 CDCA5Q96FF9 252 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 AGO4Q9HCK5 861 aaKnown RBP20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 ODF2LQ9ULJ1 636 aa20.43■□□□□ 0.86
PDLIM4-201ENST00000253754 TISP43B9A030 160 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 TCP1P17987 556 aaKnown RBP20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 MUTP22033 750 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 CBWD6Q4V339 395 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 CBWD3Q5JTY5 395 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 CBWD5Q5RIA9 395 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 MOB2Q70IA6 237 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 TXLNBQ8N3L3 684 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 ATG4CQ96DT6 458 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 TMOD4Q9NZQ9 345 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 SEL1LQ9UBV2 794 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 TARSL2A2RTX5 802 aaKnown RBP20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 TUBBP07437 444 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 GUCY2CP25092 1073 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 JAM2P57087 298 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 RPS6P62753 249 aaKnown RBP20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 RDH13Q8NBN7 331 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 C12orf42Q96LP6 360 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 LRRC1Q9BTT6 524 aa20.42■□□□□ 0.86
PDLIM4-201ENST00000253754 FAM170AA1A519 330 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 IQCA1LA6NCM1 817 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 VWA5AO00534 786 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 ZBED4O75132 1171 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 BCRP11274 1271 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 NF2P35240 595 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 IREB2P48200 963 aaKnown RBP20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 MTMR1Q13613 665 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 TTLL12Q14166 644 aaPredicted RBP20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 CCDC181Q5TID7 509 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 HS2ST1Q7LGA3 356 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 LUC7LQ9NQ29 371 aaKnown RBP20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 KCND2Q9NZV8 630 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 UBIAD1Q9Y5Z9 338 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 K7ENM7 598 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 MYCLP12524 364 aaPredicted RBP20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 TNNT3P45378 269 aaPredicted RBP20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 UGCGQ16739 394 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 PCNX4Q63HM2 1172 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 ZNF572Q7Z3I7 529 aaPredicted RBP20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 MCF2L2Q86YR7 1114 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 GOLPH3Q9H4A6 298 aa20.41■□□□□ 0.86
PDLIM4-201ENST00000253754 PARP14Q460N5 1801 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 GRID2IPA4D2P6 1211 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 P4HBP07237 508 aaKnown RBP20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 FMO5P49326 533 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 SLC7A5Q01650 507 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 PTPROQ16827 1216 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 SYCP3Q8IZU3 236 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 DMAC2Q9NW81 257 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 DMGDHQ9UI17 866 aaKnown RBP20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 SCN4AP35499 1836 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 OTOFQ9HC10 1997 aa20.4■□□□□ 0.86
PDLIM4-201ENST00000253754 ATP9AO75110 1047 aa20.39■□□□□ 0.86
PDLIM4-201ENST00000253754 PPP1R37O75864 691 aa20.39■□□□□ 0.86
PDLIM4-201ENST00000253754 GFPT2O94808 682 aa20.39■□□□□ 0.86
PDLIM4-201ENST00000253754 NFIL3Q16649 462 aa20.39■□□□□ 0.86
PDLIM4-201ENST00000253754 MMGT1Q8N4V1 131 aa20.39■□□□□ 0.86
PDLIM4-201ENST00000253754 CLMNQ96JQ2 1002 aa20.39■□□□□ 0.86
PDLIM4-201ENST00000253754 STRA6Q9BX79 667 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms