RNA–Protein interactions for RNA: ENST00000253458.11

GSE1-201, Transcript of Gse1 coiled-coil protein, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GSE1, Length 7,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-201ENST00000253458 PDE11AQ9HCR9 933 aa13.85□□□□□ -0.19
GSE1-201ENST00000253458 ANAPC7Q9UJX3 599 aa13.85□□□□□ -0.19
GSE1-201ENST00000253458 TTLL4Q14679 1199 aa13.85□□□□□ -0.19
GSE1-201ENST00000253458 E2F5Q15329 346 aa13.85□□□□□ -0.19
GSE1-201ENST00000253458 COA1Q9GZY4 146 aa13.85□□□□□ -0.19
GSE1-201ENST00000253458 POLR3FQ9H1D9 316 aaPredicted RBP13.85□□□□□ -0.19
GSE1-201ENST00000253458 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.85□□□□□ -0.19
GSE1-201ENST00000253458 TAGAPQ8N103 731 aa13.85□□□□□ -0.19
GSE1-201ENST00000253458 GFM2Q969S9 779 aaKnown RBP13.85□□□□□ -0.19
GSE1-201ENST00000253458 VMP1Q96GC9 406 aa13.85□□□□□ -0.19
GSE1-201ENST00000253458 SLC13A1Q9BZW2 595 aa13.85□□□□□ -0.19
GSE1-201ENST00000253458 DHX36Q9H2U1 1008 aaKnown RBP13.85□□□□□ -0.19
GSE1-201ENST00000253458 INTS9Q9NV88 658 aaKnown RBP13.85□□□□□ -0.19
GSE1-201ENST00000253458 PP2D1A8MPX8 630 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 A8MXQ7 604 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 POLRMTO00411 1230 aaKnown RBP13.84□□□□□ -0.19
GSE1-201ENST00000253458 SP100P23497 879 aaPredicted RBP13.84□□□□□ -0.19
GSE1-201ENST00000253458 BPIFB4P59827 614 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 FLOT2Q14254 428 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 AMHR2Q16671 573 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 GLE1Q53GS7 698 aaKnown RBP13.84□□□□□ -0.19
GSE1-201ENST00000253458 VCX3AQ9NNX9 186 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 NUP153P49790 1475 aaKnown RBP13.84□□□□□ -0.19
GSE1-201ENST00000253458 ZMYM1Q5SVZ6 1142 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 OR6P1Q8NGX9 317 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 TRAIPQ9BWF2 469 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 SPTLC1O15269 473 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 CENPAP49450 140 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 CDHR1Q96JP9 859 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 TMEM206Q9H813 350 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 MINPP1Q9UNW1 487 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 NEDD4P46934 1319 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 METP08581 1390 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 IFT88Q13099 833 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 ANGPT1Q15389 498 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 PCSK7Q16549 785 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 PYROXD1Q8WU10 500 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 TRIM8Q9BZR9 551 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 ATP6V0A4Q9HBG4 840 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 ECEL1O95672 775 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 WHAMMP3Q1A5X7 153 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 PRR23CQ6ZRP0 262 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 CCNYL1Q8N7R7 359 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 ATP11CQ8NB49 1132 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 STAG1Q8WVM7 1258 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 DNAJC7Q99615 494 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 TEKT2Q9UIF3 430 aa13.84□□□□□ -0.19
GSE1-201ENST00000253458 GRAP2O75791 330 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 OR1G1P47890 313 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 GPT2Q8TD30 523 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 TMEM143Q96AN5 459 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 HOMER3Q9NSC5 361 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 SPAG7O75391 227 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 LARGE1O95461 756 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 CCDC159P0C7I6 412 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 CMA1P23946 247 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 RFX3P48380 749 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 UBE3CQ15386 1083 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.19
GSE1-201ENST00000253458 CACUL1Q86Y37 369 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 NHEJ1Q9H9Q4 299 aaPredicted RBP13.83□□□□□ -0.19
GSE1-201ENST00000253458 SPON1Q9HCB6 807 aa13.83□□□□□ -0.19
GSE1-201ENST00000253458 TMEM2Q9UHN6 1383 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 CCT5P48643 541 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 SFR1Q86XK3 245 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 RRAGDQ9NQL2 400 aaPredicted RBP13.83□□□□□ -0.2
GSE1-201ENST00000253458 ATG3Q9NT62 314 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 CLCN1P35523 988 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 KRT80Q6KB66 452 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 SAMD7Q7Z3H4 446 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 LRRC8AQ8IWT6 810 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 ULK4Q96C45 1275 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 CAPS2Q9BXY5 557 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 FARP1Q9Y4F1 1045 aaPredicted RBP13.83□□□□□ -0.2
GSE1-201ENST00000253458 EXOC1LA0A1B0GW35 172 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 TXNP10599 105 aaKnown RBP13.83□□□□□ -0.2
GSE1-201ENST00000253458 GAP43P17677 238 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 CARSP49589 748 aaKnown RBP13.83□□□□□ -0.2
GSE1-201ENST00000253458 SSH3Q8TE77 659 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 C11orf70Q9BRQ4 267 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 HAUS8Q9BT25 410 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 PACSIN2Q9UNF0 486 aaPredicted RBP13.83□□□□□ -0.2
GSE1-201ENST00000253458 ENDOD1O94919 500 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 BCAS4Q8TDM0 211 aa13.83□□□□□ -0.2
GSE1-201ENST00000253458 GFAPP14136 432 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 ETFBP38117 255 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 PHKA2P46019 1235 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 MGAT5BQ3V5L5 792 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 MDH1BQ5I0G3 518 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 ZC3H18Q86VM9 953 aaKnown RBP13.82□□□□□ -0.2
GSE1-201ENST00000253458 CDR2LQ86X02 465 aaPredicted RBP13.82□□□□□ -0.2
GSE1-201ENST00000253458 AHI1Q8N157 1196 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 DHX35Q9H5Z1 703 aaKnown RBP13.82□□□□□ -0.2
GSE1-201ENST00000253458 CD209Q9NNX6 404 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 LRRC31Q6UY01 552 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 TMEM179Q6ZVK1 233 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 DDX42Q86XP3 938 aaKnown RBP eCLIP13.82□□□□□ -0.29e-6■□□□□ 9.6
GSE1-201ENST00000253458 BEST2Q8NFU1 509 aa13.82□□□□□ -0.2
GSE1-201ENST00000253458 EIF2AK4Q9P2K8 1649 aaKnown RBP13.82□□□□□ -0.2
GSE1-201ENST00000253458 KRT14P02533 472 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms