RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 TSEN2Q8NCE0 465 aaKnown RBP21.3■■□□□ 1
CDC42EP1-201ENST00000249014 TPCN2Q8NHX9 752 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 LNX1Q8TBB1 728 aaPredicted RBP21.3■■□□□ 1
CDC42EP1-201ENST00000249014 ZBED3Q96IU2 234 aaPredicted RBP21.3■■□□□ 1
CDC42EP1-201ENST00000249014 GPR88Q9GZN0 384 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 GDF3Q9NR23 364 aa21.3■■□□□ 1
CDC42EP1-201ENST00000249014 KCNK3O14649 394 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 KIF4AO95239 1232 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 BCRP11274 1271 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 DGKZQ13574 1117 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 PADI6Q6TGC4 694 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 MIER3Q7Z3K6 550 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 USP38Q8NB14 1042 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 HOOK2Q96ED9 719 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 KRT12Q99456 494 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 DNAJC12Q9UKB3 198 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 ZNRF3Q9ULT6 936 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 ESYT3A0FGR9 886 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 PHF20L1A8MW92 1017 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 HEXIM1O94992 359 aaKnown RBP21.29■■□□□ 1
CDC42EP1-201ENST00000249014 ZBTB48P10074 688 aaPredicted RBP21.29■■□□□ 1
CDC42EP1-201ENST00000249014 DPEP1P16444 411 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 ACTN2P35609 894 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 SOX5P35711 763 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 ITGB3BPQ13352 177 aaPredicted RBP21.29■■□□□ 1
CDC42EP1-201ENST00000249014 DRAP1Q14919 205 aaPredicted RBP21.29■■□□□ 1
CDC42EP1-201ENST00000249014 EMBQ6PCB8 327 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 VPS36Q86VN1 386 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 RDH13Q8NBN7 331 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 AGBL3Q8NEM8 1001 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 SLC30A5Q8TAD4 765 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 U2AF1L4Q8WU68 220 aaKnown RBP21.29■■□□□ 1
CDC42EP1-201ENST00000249014 STK33Q9BYT3 514 aa21.29■■□□□ 1
CDC42EP1-201ENST00000249014 ATP8B3O60423 1300 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 H2AFZP0C0S5 128 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 CARSP49589 748 aaKnown RBP21.28■■□□□ 1
CDC42EP1-201ENST00000249014 H2AFVQ71UI9 128 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 AFAP1L1Q8TED9 768 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 TAF4BQ92750 862 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 CAVIN3Q969G5 261 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 EPB41L5Q9HCM4 733 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 TMEM59LQ9UK28 342 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 ZHX2Q9Y6X8 837 aa21.28■■□□□ 1
CDC42EP1-201ENST00000249014 CES2O00748 559 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 MRPS9P82933 396 aaKnown RBP21.27■■□□□ 1
CDC42EP1-201ENST00000249014 GUCY2DQ02846 1103 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 CXCL9Q07325 125 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 PPP2R5AQ15172 486 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 IFI16Q16666 785 aaKnown RBP21.27■■□□□ 1
CDC42EP1-201ENST00000249014 MUM1L1Q5H9M0 696 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 SYCP3Q8IZU3 236 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 CPXCR1Q8N123 301 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 GOLGA5Q8TBA6 731 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 NEK9Q8TD19 979 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 INTS2Q9H0H0 1204 aaKnown RBP21.27■■□□□ 1
CDC42EP1-201ENST00000249014 TISP43B9A030 160 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 K7ENM7 598 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 EXOC3O60645 756 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 BFSP1Q12934 665 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 TKFCQ3LXA3 575 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 SLC9A9Q8IVB4 645 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 GLYCTKQ8IVS8 523 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 IFT20Q8IY31 132 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 NIM1KQ8IY84 436 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 PRPF38AQ8NAV1 312 aaKnown RBP21.27■■□□□ 1
CDC42EP1-201ENST00000249014 NFU1Q9UMS0 254 aa21.27■■□□□ 1
CDC42EP1-201ENST00000249014 P4HBP07237 508 aaKnown RBP21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 GALCP54803 685 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 SPP2Q13103 211 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 SLFN11Q7Z7L1 901 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 SYT11Q9BT88 431 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 AGO4Q9HCK5 861 aaKnown RBP21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 INTUQ9ULD6 942 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 A0A0A6YYK5 440 aaPredicted RBP21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 FAM153BP0C7A2 387 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 ALAS1P13196 640 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 MYL7Q01449 175 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 TRADDQ15628 312 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 FAM153CQ494X1 144 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 SH2D3AQ9BRG2 576 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 RAVER2Q9HCJ3 691 aaKnown RBP21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 HOMER2Q9NSB8 354 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 APEX2Q9UBZ4 518 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 FAM153AQ9UHL3 310 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 UBIAD1Q9Y5Z9 338 aa21.26■□□□□ 0.99
CDC42EP1-201ENST00000249014 RAD51CO43502 376 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 RARRES1P49788 294 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 DLG4P78352 724 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 NIPA1Q7RTP0 329 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 METTL13Q8N6R0 699 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 LMO3Q8TAP4 145 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 CASKIN2Q8WXE0 1202 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 IFT81Q8WYA0 676 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 SH3GL2Q99962 352 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 PCIF1Q9H4Z3 704 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 STXBP5LQ9Y2K9 1186 aa21.25■□□□□ 0.99
CDC42EP1-201ENST00000249014 WDR46O15213 610 aaKnown RBP21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 GHRHRQ02643 423 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 RASA3Q14644 834 aa21.24■□□□□ 0.99
CDC42EP1-201ENST00000249014 PCNX4Q63HM2 1172 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms