RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 USP17L11C9JVI0 530 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 USP17L18D6R9N7 530 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 USP17L22D6RA61 530 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 USP17L17D6RBQ6 530 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 USP17L19D6RCP7 530 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 USP17L20D6RJB6 530 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 EPHB6O15197 1021 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 ZBED4O75132 1171 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 SCP2P22307 547 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 USP17L24Q0WX57 530 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 BIRC3Q13489 604 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 TRADDQ15628 312 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 USP17L6PQ6QN14 398 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 GUF1Q8N442 669 aaKnown RBP14.42□□□□□ -0.1
PEX1-201ENST00000248633 AENQ8WTP8 325 aaKnown RBP14.42□□□□□ -0.1
PEX1-201ENST00000248633 DCAF4Q8WV16 495 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 PDGFDQ9GZP0 370 aaPredicted RBP14.42□□□□□ -0.1
PEX1-201ENST00000248633 IQCGQ9H095 443 aaKnown RBP14.42□□□□□ -0.1
PEX1-201ENST00000248633 POTEFA5A3E0 1075 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 CCDC160A6NGH7 325 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 DDTLA6NHG4 134 aaPredicted RBP14.42□□□□□ -0.1
PEX1-201ENST00000248633 ASNSP08243 561 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 POTEIP0CG38 1075 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 SLC9A1P19634 815 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 ATP5DP30049 168 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 GBP1P32455 592 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 HHATQ5VTY9 493 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 POTEGQ6S5H5 508 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 POTEEQ6S8J3 1075 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 ZNF408Q9H9D4 720 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 MAD2L2Q9UI95 211 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 HERC5Q9UII4 1024 aaKnown RBP14.42□□□□□ -0.1
PEX1-201ENST00000248633 KDM3AQ9Y4C1 1321 aa14.42□□□□□ -0.1
PEX1-201ENST00000248633 GAKO14976 1311 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 CCDC125Q86Z20 511 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 FAM186BQ8IYM0 893 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 RAD54LQ92698 747 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 ZNF341Q9BYN7 854 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 MYH14Q7Z406 1995 aaKnown RBP14.41□□□□□ -0.1
PEX1-201ENST00000248633 ZNF543Q08ER8 600 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 SLC18A3Q16572 532 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 MUM1Q2TAK8 710 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 EAPPQ56P03 285 aaPredicted RBP14.41□□□□□ -0.1
PEX1-201ENST00000248633 DPY19L2Q6NUT2 758 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 MICALL2Q8IY33 904 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 STMN2Q93045 179 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 SPDL1Q96EA4 605 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.41□□□□□ -0.18e-8■■■□□ 15.1
PEX1-201ENST00000248633 BHMT2Q9H2M3 363 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 SEMA6BQ9H3T3 888 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 CPSF2Q9P2I0 782 aaKnown RBP14.41□□□□□ -0.1
PEX1-201ENST00000248633 PCDHAC2Q9Y5I4 1007 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 CLGNO14967 610 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 TGFB2P61812 414 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 TAF11Q15544 211 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 CYB5D1Q6P9G0 228 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 SH3RF1Q7Z6J0 888 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 MCUR1Q96AQ8 359 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 DUSP9Q99956 384 aaKnown RBP14.41□□□□□ -0.1
PEX1-201ENST00000248633 TLR10Q9BXR5 811 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 TMEM39BQ9GZU3 492 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 GEMIN8Q9NWZ8 242 aaKnown RBP14.41□□□□□ -0.1
PEX1-201ENST00000248633 CHN1P15882 459 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 RASA3Q14644 834 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 RCSD1Q6JBY9 416 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.41□□□□□ -0.1
PEX1-201ENST00000248633 EP400NLQ6ZTU2 488 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 SFR1Q86XK3 245 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 SULF1Q8IWU6 871 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 FAM178BQ8IXR5 827 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 ERGIC2Q96RQ1 377 aa14.41□□□□□ -0.1
PEX1-201ENST00000248633 PRMT1Q99873 361 aaKnown RBP14.41□□□□□ -0.1
PEX1-201ENST00000248633 MRPL11Q9Y3B7 192 aaKnown RBP14.41□□□□□ -0.1
PEX1-201ENST00000248633 ARHGEF35A5YM69 484 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 POLR2MP0CAP2 368 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 BCRP11274 1271 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 MYCLP12524 364 aaPredicted RBP14.4□□□□□ -0.1
PEX1-201ENST00000248633 ERFP50548 548 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 ZFPM1Q8IX07 1006 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 PPP1R14CQ8TAE6 165 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 PIGOQ8TEQ8 1089 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 CNOT10Q9H9A5 744 aaKnown RBP14.4□□□□□ -0.1
PEX1-201ENST00000248633 AS3MTQ9HBK9 375 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 SPON1Q9HCB6 807 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 CNOT7Q9UIV1 285 aaKnown RBP14.4□□□□□ -0.1
PEX1-201ENST00000248633 CCPG1Q9ULG6 757 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 BZW2Q9Y6E2 419 aaKnown RBP14.4□□□□□ -0.1
PEX1-201ENST00000248633 NUP188Q5SRE5 1749 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 HARSP12081 509 aaKnown RBP14.4□□□□□ -0.1
PEX1-201ENST00000248633 PBX1P40424 430 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 QRICH1Q2TAL8 776 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 USP38Q8NB14 1042 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.4□□□□□ -0.1
PEX1-201ENST00000248633 TPX2Q9ULW0 747 aaKnown RBP14.4□□□□□ -0.1
PEX1-201ENST00000248633 PDHA1P08559 390 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 PTK2Q05397 1052 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 HP1BP3Q5SSJ5 553 aaPredicted RBP14.4□□□□□ -0.1
PEX1-201ENST00000248633 KDM7AQ6ZMT4 941 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 FAM151AQ8WW52 585 aa14.4□□□□□ -0.1
PEX1-201ENST00000248633 GLG1Q92896 1179 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms